Information for 18-CCTGCCCAGT (Motif 22)

A G T C G T A C C G A T C A T G A T G C A G T C A G T C C G T A C T A G A C G T
Reverse Opposite:
T G C A A G T C C G A T A C T G A C T G A T C G G A T C C G T A A C T G T A C G
p-value:1e-7
log p-value:-1.839e+01
Information Content per bp:1.836
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif24.8
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets41.0 +/- 29.1bp
Average Position of motif in Background58.1 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:CCTGCCCAGT--
--TGCCCAGNHW
 A G T C G T A C C G A T C A T G A T G C A G T C A G T C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCTGCCCAGT
-ATGCCCACC
 A G T C G T A C C G A T C A T G A T G C A G T C A G T C C G T A C T A G A C G T
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCTGCCCAGT
-CTGCCCGCA
 A G T C G T A C C G A T C A T G A T G C A G T C A G T C C G T A C T A G A C G T
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCTGCCCAGT---
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A G T C G T A C C G A T C A T G A T G C A G T C A G T C C G T A C T A G A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTGCCCAGT
GGTGCCAAGT
 A G T C G T A C C G A T C A T G A T G C A G T C A G T C C G T A C T A G A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTGCCCAGT--
ACTAGCCAATCA
 A G T C G T A C C G A T C A T G A T G C A G T C A G T C C G T A C T A G A C G T A C G T A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCCCAGT
SNGCACCTGCHS---
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G A T C A T G A T G C A G T C A G T C C G T A C T A G A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCTGCCCAGT
-TTGCCAAG-
 A G T C G T A C C G A T C A T G A T G C A G T C A G T C C G T A C T A G A C G T
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCTGCCCAGT---
ACATGCCCGGGCAT
 A C G T A G T C G T A C C G A T C A T G A T G C A G T C A G T C C G T A C T A G A C G T A C G T A C G T A C G T
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCCCAGT-
CTATCCCCGCCCTATT
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G A T C A T G A T G C A G T C A G T C C G T A C T A G A C G T A C G T
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T