Information for 15-CCATGGTACT (Motif 21)

A G T C A G T C C T G A A C G T C A T G A C T G A G C T G T C A A G T C G A C T
Reverse Opposite:
C G T A C T A G A C G T C T G A A G T C G A T C C G T A A G C T A C T G A C T G
p-value:1e-9
log p-value:-2.105e+01
Information Content per bp:1.854
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets57.8 +/- 29.2bp
Average Position of motif in Background46.6 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCATGGTACT
CCATTGTTYB
 A G T C A G T C C T G A A C G T C A T G A C T G A G C T G T C A A G T C G A C T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCATGGTACT
NCCATTGTTC-
 A C G T A G T C A G T C C T G A A C G T C A T G A C T G A G C T G T C A A G T C G A C T
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCATGGTACT
CCATTGTTTT
 A G T C A G T C C T G A A C G T C A T G A C T G A G C T G T C A A G T C G A C T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCATGGTACT
CCATTGTTC-
 A G T C A G T C C T G A A C G T C A T G A C T G A G C T G T C A A G T C G A C T
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------CCATGGTACT---
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C G T C A T G A C T G A G C T G T C A A G T C G A C T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCATGGTACT
NCCATTGTTY-
 A C G T A G T C A G T C C T G A A C G T C A T G A C T G A G C T G T C A A G T C G A C T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:7
Score:0.64
Offset:-8
Orientation:forward strand
Alignment:--------CCATGGTACT--
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C G T C A T G A C T G A G C T G T C A A G T C G A C T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCATGGTACT
CCTTTGTT--
 A G T C A G T C C T G A A C G T C A T G A C T G A G C T G T C A A G T C G A C T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCATGGTACT--
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A A C G T C A T G A C T G A G C T G T C A A G T C G A C T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCATGGTACT
CCWTTGTYYB
 A G T C A G T C C T G A A C G T C A T G A C T G A G C T G T C A A G T C G A C T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G