Information for 13-AACATTAGGT (Motif 20)

C G T A C G T A A G T C C G T A A C G T A C G T C G T A C T A G A C T G C G A T
Reverse Opposite:
C G T A G T A C A G T C C G A T C G T A C G T A A C G T A C T G A C G T A C G T
p-value:1e-10
log p-value:-2.333e+01
Information Content per bp:1.890
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets60.6 +/- 22.3bp
Average Position of motif in Background39.3 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0065.1_Sox15_1/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AACATTAGGT--
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C T A G A C T G C G A T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------AACATTAGGT
NNTNNCAATATTAG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C T A G A C T G C G A T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------AACATTAGGT
NNTNNCAATATTAG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C T A G A C T G C G A T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AACATTAGGT
GAACAATGG--
 A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C T A G A C T G C G A T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AACATTAGGT
AACATATGTT
 C G T A C G T A A G T C C G T A A C G T A C G T C G T A C T A G A C T G C G A T
T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------AACATTAGGT-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C T A G A C T G C G A T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AACATTAGGT
NAACAAT----
 A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C T A G A C T G C G A T
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:8
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------AACATTAGGT-----
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C T A G A C T G C G A T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

BHLHE23/MA0817.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AACATTAGGT-
AAACATATGTTT
 A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C T A G A C T G C G A T A C G T
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AACATTAGGT-
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T C G T A C T A G A C T G C G A T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T