Information for 10-TTCTTTCCAA (Motif 18)

A C G T A C G T A G T C A C G T A C G T A C G T A G T C A G T C C G T A C T G A
Reverse Opposite:
A G C T A C G T A C T G A C T G G T C A C G T A C G T A A C T G G T C A G T C A
p-value:1e-11
log p-value:-2.697e+01
Information Content per bp:1.915
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets42.7 +/- 31.7bp
Average Position of motif in Background49.8 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TTCTTTCCAA-
-ATTTTCCATT
 A C G T A C G T A G T C A C G T A C G T A C G T A G T C A G T C C G T A C T G A A C G T
A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TTCTTTCCAA-
-ATTTTCCATT
 A C G T A C G T A G T C A C G T A C G T A C G T A G T C A G T C C G T A C T G A A C G T
A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TTCTTTCCAA-
-ATTTTCCATT
 A C G T A C G T A G T C A C G T A C G T A C G T A G T C A G T C C G T A C T G A A C G T
A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TTCTTTCCAA
--TTTTCCA-
 A C G T A C G T A G T C A C G T A C G T A C G T A G T C A G T C C G T A C T G A
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTCTTTCCAA-
-ATTTTCCATT
 A C G T A C G T A G T C A C G T A C G T A C G T A G T C A G T C C G T A C T G A A C G T
A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TTCTTTCCAA
----TGCCAA
 A C G T A C G T A G T C A C G T A C G T A C G T A G T C A G T C C G T A C T G A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTCTTTCCAA--
--GGTGCCAAGT
 A C G T A C G T A G T C A C G T A C G T A C G T A G T C A G T C C G T A C T G A A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTCTTTCCAA--
TTTTTTTTCNNGTN
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A G T C C G T A C T G A A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTCTTTCCAA-
---TTGCCAAG
 A C G T A C G T A G T C A C G T A C G T A C G T A G T C A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TTCTTTCCAA-
--CGTGCCAAG
 A C G T A C G T A G T C A C G T A C G T A C G T A G T C A G T C C G T A C T G A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G