Information for 13-RAGTTTGTHTTRC (Motif 15)

C T A G C T G A A C T G A C G T A C G T C G A T C T A G A G C T G A T C A C G T A C G T C T G A T A G C
Reverse Opposite:
A T C G G A C T C G T A C G T A C T A G T C G A A G T C G C T A C G T A C G T A G T A C G A C T G A T C
p-value:1e-11
log p-value:-2.752e+01
Information Content per bp:1.750
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets49.4 +/- 26.7bp
Average Position of motif in Background74.2 +/- 10.1bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:RAGTTTGTHTTRC
-AGTTTCAKTTTC
 C T A G C T G A A C T G A C G T A C G T C G A T C T A G A G C T G A T C A C G T A C G T C T G A T A G C
A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-RAGTTTGTHTTRC-
TCAGTTTCATTTTCC
 A C G T C T A G C T G A A C T G A C G T A C G T C G A T C T A G A G C T G A T C A C G T A C G T C T G A T A G C A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:RAGTTTGTHTTRC
-AGTTTCAGTTTC
 C T A G C T G A A C T G A C G T A C G T C G A T C T A G A G C T G A T C A C G T A C G T C T G A T A G C
A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:RAGTTTGTHTTRC
-RSTTTCRSTTTC
 C T A G C T G A A C T G A C G T A C G T C G A T C T A G A G C T G A T C A C G T A C G T C T G A T A G C
A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-RAGTTTGTHTTRC--
NNTGTTTATTTTGGCA
 A C G T C T A G C T G A A C T G A C G T A C G T C G A T C T A G A G C T G A T C A C G T A C G T C T G A T A G C A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:RAGTTTGTHTTRC
-ACTTTCACTTTC
 C T A G C T G A A C T G A C G T A C G T C G A T C T A G A G C T G A T C A C G T A C G T C T G A T A G C
A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--RAGTTTGTHTTRC
GAATGTTTGTTT---
 A C G T A C G T C T A G C T G A A C T G A C G T A C G T C G A T C T A G A G C T G A T C A C G T A C G T C T G A T A G C
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-RAGTTTGTHTTRC-
TNAGTTTCGATTTTN
 A C G T C T A G C T G A A C T G A C G T A C G T C G A T C T A G A G C T G A T C A C G T A C G T C T G A T A G C A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:RAGTTTGTHTTRC
-ASTTTCASTTYC
 C T A G C T G A A C T G A C G T A C G T C G A T C T A G A G C T G A T C A C G T A C G T C T G A T A G C
A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RAGTTTGTHTTRC
-CCTTTGTTTT--
 C T A G C T G A A C T G A C G T A C G T C G A T C T A G A G C T G A T C A C G T A C G T C T G A T A G C
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T