Information for 10-CTGTACTAGCTAG (Motif 12)

T A G C C G A T C A T G C A G T G C T A G T A C A G C T C G T A C A T G G T A C A G C T C G T A C T A G
Reverse Opposite:
A G T C G C A T C T G A C A T G G T A C C G A T C T G A A C T G C G A T G T C A G T A C C G T A A C T G
p-value:1e-12
log p-value:-2.878e+01
Information Content per bp:1.673
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.7 +/- 28.0bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0092.1_Lhx2/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTGTACTAGCTAG-----
-TAAACTAATTAGTGAAC
 T A G C C G A T C A T G C A G T G C T A G T A C A G C T C G T A C A T G G T A C A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T G C A G T C A T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A T G G T C A G T C A A T G C

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGTACTAGCTAG-----
-GANGTTAACTAGTTTNN
 T A G C C G A T C A T G C A G T G C T A G T A C A G C T C G T A C A T G G T A C A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PH0039.1_Mnx1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTGTACTAGCTAG-----
--GTACTAATTAGTGGCG
 T A G C C G A T C A T G C A G T G C T A G T A C A G C T C G T A C A T G G T A C A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G

PH0034.1_Gbx2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTGTACTAGCTAG-----
-AGCGCTAATTAGCGATT
 T A G C C G A T C A T G C A G T G C T A G T A C A G C T C G T A C A T G G T A C A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

PH0031.1_Evx1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTGTACTAGCTAG-----
-AGAACTAATTAGTGGAC
 T A G C C G A T C A T G C A G T G C T A G T A C A G C T C G T A C A T G G T A C A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C A G G C T A T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T A T C G T A C G C G T A T A G C

PH0155.1_Prrx2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGTACTAGCTAG----
NTTCGCTAATTAGCTNT
 T A G C C G A T C A T G C A G T G C T A G T A C A G C T C G T A C A T G G T A C A G C T C G T A C T A G A C G T A C G T A C G T A C G T
G A C T G C A T G A C T G T A C T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A G T A C G T G C A T

PH0131.1_Pax4/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGTACTAGCTAG-----
-TGAACTAATTAGCCCAC
 T A G C C G A T C A T G C A G T G C T A G T A C A G C T C G T A C A T G G T A C A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T G C A T T A C G T C G A C G T A A G T C C A G T C G T A C T G A A G C T G A C T G T C A C T A G G A T C A G T C T A G C C T G A G T A C

PH0001.1_Alx3/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGTACTAGCTAG-----
-TAAACTAATTAGCTGAG
 T A G C C G A T C A T G C A G T G C T A G T A C A G C T C G T A C A T G G T A C A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C G A G C T A T C G A G A T C A G C T G T C A C T G A A G C T A C G T C T G A C T A G G A T C A G C T T A C G G C T A T C A G

LBX1/MA0618.1/Jaspar

Match Rank:9
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CTGTACTAGCTAG
-----TTAATTAG
 T A G C C G A T C A T G C A G T G C T A G T A C A G C T C G T A C A T G G T A C A G C T C G T A C T A G
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G

HMBOX1/MA0895.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CTGTACTAGCTAG-
----GTTAACTAGN
 T A G C C G A T C A T G C A G T G C T A G T A C A G C T C G T A C A T G G T A C A G C T C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T