Information for 9-RGSAGCWGGCAGG (Motif 10)

C T G A A C T G T A G C C G T A T C A G A T G C C G T A A C T G A T C G T G A C C G T A C T A G T C A G
Reverse Opposite:
A G T C A G T C C G A T A C T G A T G C A G T C C G A T A T C G A G T C C G A T A T C G A G T C G A C T
p-value:1e-13
log p-value:-3.182e+01
Information Content per bp:1.735
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif6.29%
Number of Background Sequences with motif99.1
Percentage of Background Sequences with motif1.52%
Average Position of motif in Targets55.3 +/- 23.7bp
Average Position of motif in Background45.6 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----RGSAGCWGGCAGG
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T C T G A A C T G T A G C C G T A T C A G A T G C C G T A A C T G A T C G T G A C C G T A C T A G T C A G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-RGSAGCWGGCAGG
CAGCAGCTGN----
 A C G T C T G A A C T G T A G C C G T A T C A G A T G C C G T A A C T G A T C G T G A C C G T A C T A G T C A G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---RGSAGCWGGCAGG
NGNGACAGCTGCN---
 A C G T A C G T A C G T C T G A A C T G T A G C C G T A T C A G A T G C C G T A A C T G A T C G T G A C C G T A C T A G T C A G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--RGSAGCWGGCAGG
NNAGCAGCTGCT---
 A C G T A C G T C T G A A C T G T A G C C G T A T C A G A T G C C G T A A C T G A T C G T G A C C G T A C T A G T C A G
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:RGSAGCWGGCAGG
GACAGCTGCAG--
 C T G A A C T G T A G C C G T A T C A G A T G C C G T A A C T G A T C G T G A C C G T A C T A G T C A G
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:RGSAGCWGGCAGG
AGCAGCTGCT---
 C T G A A C T G T A G C C G T A T C A G A T G C C G T A A C T G A T C G T G A C C G T A C T A G T C A G
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--RGSAGCWGGCAGG
NNVVCAGCTGBN---
 A C G T A C G T C T G A A C T G T A G C C G T A T C A G A T G C C G T A A C T G A T C G T G A C C G T A C T A G T C A G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-RGSAGCWGGCAGG
SDGCAGGTGCNS--
 A C G T C T G A A C T G T A G C C G T A T C A G A T G C C G T A A C T G A T C G T G A C C G T A C T A G T C A G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:RGSAGCWGGCAGG
ANCAGCTG-----
 C T G A A C T G T A G C C G T A T C A G A T G C C G T A A C T G A T C G T G A C C G T A C T A G T C A G
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:RGSAGCWGGCAGG
AACAGCTGCAG--
 C T G A A C T G T A G C C G T A T C A G A T G C C G T A A C T G A T C G T G A C C G T A C T A G T C A G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T