Information for 2-CTGYTGACTTTGGTCT (Motif 4)

A G T C A C G T C T A G A G T C A C G T A C T G C T G A A T G C A C G T A C G T A C G T A C T G A C T G G A C T A G T C C G A T
Reverse Opposite:
C G T A A C T G C G T A G T A C G T A C C G T A G T C A C G T A T A C G G A C T A G T C C G T A C T A G A G T C C G T A A C T G
p-value:1e-18
log p-value:-4.328e+01
Information Content per bp:1.839
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.9 +/- 22.7bp
Average Position of motif in Background24.0 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTGYTGACTTTGGTCT
---TTGACTTTT----
 A G T C A C G T C T A G A G T C A C G T A C T G C T G A A T G C A C G T A C G T A C G T A C T G A C T G G A C T A G T C C G A T
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTGYTGACTTTGGTCT-
--GCTGACCTTGAACTN
 A G T C A C G T C T A G A G T C A C G T A C T G C T G A A T G C A C G T A C G T A C G T A C T G A C T G G A C T A G T C C G A T A C G T
A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGYTGACTTTGGTCT
NNTGTTTATTTTGGCA-
 A C G T A G T C A C G T C T A G A G T C A C G T A C T G C T G A A T G C A C G T A C G T A C G T A C T G A C T G G A C T A G T C C G A T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTGYTGACTTTGGTCT--
---TGGACTTTGNNCTCN
 A G T C A C G T C T A G A G T C A C G T A C T G C T G A A T G C A C G T A C G T A C G T A C T G A C T G G A C T A G T C C G A T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTGYTGACTTTGGTCT
----TGACCTTGACCT
 A G T C A C G T C T A G A G T C A C G T A C T G C T G A A T G C A C G T A C G T A C G T A C T G A C T G G A C T A G T C C G A T
A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTGYTGACTTTGGTCT---
---TGGACTTTGNNCTNTG
 A G T C A C G T C T A G A G T C A C G T A C T G C T G A A T G C A C G T A C G T A C G T A C T G A C T G G A C T A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTGYTGACTTTGGTCT
----TNCCTTTGATGT
 A G T C A C G T C T A G A G T C A C G T A C T G C T G A A T G C A C G T A C G T A C G T A C T G A C T G G A C T A G T C C G A T
A C G T A C G T A C G T A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTGYTGACTTTGGTCT--
----TNCCTTTGATCTTN
 A G T C A C G T C T A G A G T C A C G T A C T G C T G A A T G C A C G T A C G T A C G T A C T G A C T G G A C T A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Foxa2/MA0047.2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGYTGACTTTGGTCT
-TGTTTACTTAGG---
 A G T C A C G T C T A G A G T C A C G T A C T G C T G A A T G C A C G T A C G T A C G T A C T G A C T G G A C T A G T C C G A T
A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTGYTGACTTTGGTCT
----TGACCTTGACCT
 A G T C A C G T C T A G A G T C A C G T A C T G C T G A A T G C A C G T A C G T A C G T A C T G A C T G G A C T A G T C C G A T
A C G T A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T