Information for 12-CASAAGRCMAAGAABA (Motif 23)

T A G C C T G A A T G C G T C A C T G A C T A G C T A G T A G C T G A C C G T A C T G A A C T G G T C A C G T A A T G C G T C A
Reverse Opposite:
C A G T T A C G C G A T C A G T T G A C G A C T G C A T A C T G A T C G G A T C G A T C A G C T A C G T A T C G A G C T A T C G
p-value:1e-9
log p-value:-2.175e+01
Information Content per bp:1.597
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets70.2 +/- 29.2bp
Average Position of motif in Background31.6 +/- 1.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CASAAGRCMAAGAABA
--CAAGGHCANV----
 T A G C C T G A A T G C G T C A C T G A C T A G C T A G T A G C T G A C C G T A C T G A A C T G G T C A C G T A A T G C G T C A
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CASAAGRCMAAGAABA
-ACAAAG---------
 T A G C C T G A A T G C G T C A C T G A C T A G C T A G T A G C T G A C C G T A C T G A A C T G G T C A C G T A A T G C G T C A
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CASAAGRCMAAGAABA
VRRACAAWGG--------
 A C G T A C G T T A G C C T G A A T G C G T C A C T G A C T A G C T A G T A G C T G A C C G T A C T G A A C T G G T C A C G T A A T G C G T C A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CASAAGRCMAAGAABA
AAACAGACAAAGGAAT
 T A G C C T G A A T G C G T C A C T G A C T A G C T A G T A G C T G A C C G T A C T G A A C T G G T C A C G T A A T G C G T C A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CASAAGRCMAAGAABA
RNAACAATGG--------
 A C G T A C G T T A G C C T G A A T G C G T C A C T G A C T A G C T A G T A G C T G A C C G T A C T G A A C T G G T C A C G T A A T G C G T C A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CASAAGRCMAAGAABA
RACAAWGG--------
 T A G C C T G A A T G C G T C A C T G A C T A G C T A G T A G C T G A C C G T A C T G A A C T G G T C A C G T A A T G C G T C A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SPIC/MA0687.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CASAAGRCMAAGAABA
AAAAAGAGGAAGTA--
 T A G C C T G A A T G C G T C A C T G A C T A G C T A G T A G C T G A C C G T A C T G A A C T G G T C A C G T A A T G C G T C A
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CASAAGRCMAAGAABA
RAACAATGGN-------
 A C G T T A G C C T G A A T G C G T C A C T G A C T A G C T A G T A G C T G A C C G T A C T G A A C T G G T C A C G T A A T G C G T C A
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CASAAGRCMAAGAABA
CGGAAGTGAAAC----
 T A G C C T G A A T G C G T C A C T G A C T A G C T A G T A G C T G A C C G T A C T G A A C T G G T C A C G T A A T G C G T C A
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CASAAGRCMAAGAABA
AAAACAAAGG--------
 A C G T A C G T T A G C C T G A A T G C G T C A C T G A C T A G C T A G T A G C T G A C C G T A C T G A A C T G G T C A C G T A A T G C G T C A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T