Information for 13-TYCCCATGGGRAR (Motif 15)

A C G T A G C T A T G C A G T C A G T C C G T A A C G T A C T G A C T G A T C G C T G A C G T A T C A G
Reverse Opposite:
A G T C A C G T A G C T A T G C A G T C A G T C C G T A A C G T A C T G A C T G A T C G C T G A C G T A
p-value:1e-6
log p-value:-1.514e+01
Information Content per bp:1.892
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.5 +/- 39.5bp
Average Position of motif in Background66.7 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.3/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TYCCCATGGGRAR
ATTCCCAAGGGAAT
 A C G T A C G T A G C T A T G C A G T C A G T C C G T A A C G T A C T G A C T G A T C G C T G A C G T A T C A G
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TYCCCATGGGRAR
NGTTGCCATGGCAA-
 A C G T A C G T A C G T A G C T A T G C A G T C A G T C C G T A A C G T A C T G A C T G A T C G C T G A C G T A T C A G
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TYCCCATGGGRAR
GTCCCCAGGGGA--
 A C G T A C G T A G C T A T G C A G T C A G T C C G T A A C G T A C T G A C T G A T C G C T G A C G T A T C A G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TYCCCATGGGRAR
GGTTGCCATGGCAA-
 A C G T A C G T A C G T A G C T A T G C A G T C A G T C C G T A A C G T A C T G A C T G A T C G C T G A C G T A T C A G
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TYCCCATGGGRAR
NGTCCCNNGGGA--
 A C G T A C G T A G C T A T G C A G T C A G T C C G T A A C G T A C T G A C T G A T C G C T G A C G T A T C A G
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TYCCCATGGGRAR-
GTTGCCATGGCAACM
 A C G T A C G T A G C T A T G C A G T C A G T C C G T A A C G T A C T G A C T G A T C G C T G A C G T A T C A G A C G T
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TYCCCATGGGRAR-
----CSTGGGAAAD
 A C G T A G C T A T G C A G T C A G T C C G T A A C G T A C T G A C T G A T C G C T G A C G T A T C A G A C G T
A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Rfx1/MA0509.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TYCCCATGGGRAR
GTTGCCATGGNAAC
 A C G T A C G T A G C T A T G C A G T C A G T C C G T A A C G T A C T G A C T G A T C G C T G A C G T A T C A G
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

RFX3/MA0798.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TYCCCATGGGRAR-
CGTTGCCATGGCAACG
 A C G T A C G T A C G T A G C T A T G C A G T C A G T C C G T A A C G T A C T G A C T G A T C G C T G A C G T A T C A G A C G T
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TYCCCATGGGRAR
CGGTTGCCATGGCAAC
 A C G T A C G T A C G T A C G T A G C T A T G C A G T C A G T C C G T A A C G T A C T G A C T G A T C G C T G A C G T A T C A G
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C