Information for 10-CCTGCGTGGCTSMSCT (Motif 8)

A T G C A T G C C G A T A T C G G A T C A T C G A C G T A T C G C A T G A G T C A G C T A T G C T G A C A T G C G T A C G C A T
Reverse Opposite:
C G T A A C T G A T C G A C T G A T C G C T G A A C T G G A T C A T G C G T C A T A G C C A T G A T G C C G T A A T C G A T C G
p-value:1e-13
log p-value:-3.140e+01
Information Content per bp:1.722
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets46.8 +/- 22.7bp
Average Position of motif in Background36.2 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCTGCGTGGCTSMSCT
GTCATGCHTGRCTGS---
 A C G T A C G T A T G C A T G C C G A T A T C G G A T C A T C G A C G T A T C G C A T G A G T C A G C T A T G C T G A C A T G C G T A C G C A T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCTGCGTGGCTSMSCT-
--TGCCTGCGYCMCCTT
 A T G C A T G C C G A T A T C G G A T C A T C G A C G T A T C G C A T G A G T C A G C T A T G C T G A C A T G C G T A C G C A T A C G T
A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCGTGGCTSMSCT-
GTCACGCTTGGCTGCNCNN
 A C G T A C G T A T G C A T G C C G A T A T C G G A T C A T C G A C G T A T C G C A T G A G T C A G C T A T G C T G A C A T G C G T A C G C A T A C G T
C A T G G A C T A G T C G T C A G A T C T C A G T A G C G A C T A G C T A T C G T C A G A T G C G A C T C T A G T G A C G A T C A G T C G C A T A G T C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCTGCGTGGCTSMSCT
--TGCGTG--------
 A T G C A T G C C G A T A T C G G A T C A T C G A C G T A T C G C A T G A G T C A G C T A T G C T G A C A T G C G T A C G C A T
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCTGCGTGGCTSMSCT
CTTGAGTGGCT-----
 A T G C A T G C C G A T A T C G G A T C A T C G A C G T A T C G C A T G A G T C A G C T A T G C T G A C A T G C G T A C G C A T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCGTGGCTSMSCT
NGTCACGCTTGGCTGC---
 A C G T A C G T A C G T A T G C A T G C C G A T A T C G G A T C A T C G A C G T A T C G C A T G A G T C A G C T A T G C T G A C A T G C G T A C G C A T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCTGCGTGGCTSMSCT
--TGCGTGGGYG----
 A T G C A T G C C G A T A T C G G A T C A T C G A C G T A T C G C A T G A G T C A G C T A T G C T G A C A T G C G T A C G C A T
A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCTGCGTGGCTSMSCT
-CAGCATGACTCAGCA
 A T G C A T G C C G A T A T C G G A T C A T C G A C G T A T C G C A T G A G T C A G C T A T G C T G A C A T G C G T A C G C A T
A C G T G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CCTGCGTGGCTSMSCT
-------NGCTN----
 A T G C A T G C C G A T A T C G G A T C A T C G A C G T A T C G C A T G A G T C A G C T A T G C T G A C A T G C G T A C G C A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCTGCGTGGCTSMSCT
-TTGCGTGCVA-----
 A T G C A T G C C G A T A T C G G A T C A T C G A C G T A T C G C A T G A G T C A G C T A T G C T G A C A T G C G T A C G C A T
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T A C G T