Information for 9-CGASGSTGSCAGCCKG (Motif 7)

A T G C T A C G C G T A A T C G C T A G A T G C A C G T A C T G A T G C G A T C G T C A T A C G A G T C T A G C A C T G A T C G
Reverse Opposite:
T A G C G T A C A C T G A C T G A T G C A C G T C T A G A T C G A G T C C G T A A T C G A G T C A T G C A C G T A T G C A T C G
p-value:1e-13
log p-value:-3.170e+01
Information Content per bp:1.729
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.8 +/- 15.9bp
Average Position of motif in Background38.3 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CGASGSTGSCAGCCKG
-----ATGCCAACC--
 A T G C T A C G C G T A A T C G C T A G A T G C A C G T A C T G A T G C G A T C G T C A T A C G A G T C T A G C A C T G A T C G
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGASGSTGSCAGCCKG--
--ACTATGCCAACCTACC
 A T G C T A C G C G T A A T C G C T A G A T G C A C G T A C T G A T G C G A T C G T C A T A C G A G T C T A G C A C T G A T C G A C G T A C G T
A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CGASGSTGSCAGCCKG
-----TTGCCAAG---
 A T G C T A C G C G T A A T C G C T A G A T G C A C G T A C T G A T G C G A T C G T C A T A C G A G T C T A G C A C T G A T C G
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGASGSTGSCAGCCKG
---VGCTGWCAVB---
 A T G C T A C G C G T A A T C G C T A G A T G C A C G T A C T G A T G C G A T C G T C A T A C G A G T C T A G C A C T G A T C G
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGASGSTGSCAGCCKG
-----ATGCCCACC--
 A T G C T A C G C G T A A T C G C T A G A T G C A C G T A C T G A T G C G A T C G T C A T A C G A G T C T A G C A C T G A T C G
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CGASGSTGSCAGCCKG
----CGTGCCAAG---
 A T G C T A C G C G T A A T C G C T A G A T G C A C G T A C T G A T G C G A T C G T C A T A C G A G T C T A G C A C T G A T C G
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGASGSTGSCAGCCKG
--AGGGTAACAGC---
 A T G C T A C G C G T A A T C G C T A G A T G C A C G T A C T G A T G C G A T C G T C A T A C G A G T C T A G C A C T G A T C G
A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CGASGSTGSCAGCCKG
------TGTCANYT--
 A T G C T A C G C G T A A T C G C T A G A T G C A C G T A C T G A T G C G A T C G T C A T A C G A G T C T A G C A C T G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CGASGSTGSCAGCCKG
-----YTGWCADY---
 A T G C T A C G C G T A A T C G C T A G A T G C A C G T A C T G A T G C G A T C G T C A T A C G A G T C T A G C A C T G A T C G
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CGASGSTGSCAGCCKG
----GGTGCCAAGT--
 A T G C T A C G C G T A A T C G C T A G A T G C A C G T A C T G A T G C G A T C G T C A T A C G A G T C T A G C A C T G A T C G
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T