Information for 19-GTCTGTAGCC (Motif 33)

A C T G A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T C G T A A G T C C G T A A C T G C G T A A G T C
p-value:1e-5
log p-value:-1.280e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.0 +/- 17.3bp
Average Position of motif in Background47.5 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTCTGTAGCC
VBSYGTCTGG----
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTAGCC
AGGTCTCTAACC
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C A G T C
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTAGCC
CTGTCTGG----
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGTAGCC-
TGTCTGDCACCT
 A C G T A C T G A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C A G T C A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTAGCC
TWGTCTGV----
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTCTGTAGCC---
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTAGCC-
CTGTCTGTCACCT
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C A G T C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTCTGTAGCC---
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GTCTGTAGCC-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C A G T C A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTCTGTAGCC-----
GTCWGCTGTYYCTCT
 A C T G A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T