Information for 17-CCGGCGGCGCCAG (Motif 25)

A G T C G A T C A C T G T A C G G T A C A T C G A C T G G T A C A C T G T G A C A G T C G T C A A T C G
Reverse Opposite:
A T G C C A G T A C T G A C T G G T A C A C T G A G T C A T G C A C T G A T G C G T A C C T A G T C A G
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.775
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif105.1
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets55.1 +/- 25.6bp
Average Position of motif in Background50.2 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCGGCGGCGCCAG----
CCTTCGGCGCCAAAAGG
 A G T C G A T C A C T G T A C G G T A C A T C G A C T G G T A C A C T G T G A C A G T C G T C A A T C G A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCGGCGGCGCCAG----
AGCTCGGCGCCAAAAGC
 A G T C G A T C A C T G T A C G G T A C A T C G A C T G G T A C A C T G T G A C A G T C G T C A A T C G A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCGGCGGCGCCAG
GGGGGCGGGGCC--
 A C G T A G T C G A T C A C T G T A C G G T A C A T C G A C T G G T A C A C T G T G A C A G T C G T C A A T C G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCGGCGGCGCCAG
ANTGCCTGAGGCAAN--
 A C G T A C G T A C G T A C G T A G T C G A T C A C T G T A C G G T A C A T C G A C T G G T A C A C T G T G A C A G T C G T C A A T C G
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCGGCGGCGCCAG---
TTGGGGGCGCCCCTAG
 A G T C G A T C A C T G T A C G G T A C A T C G A C T G G T A C A C T G T G A C A G T C G T C A A T C G A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCGGCGGCGCCAG
RGKGGGCGGAGC---
 A C G T A C G T A G T C G A T C A C T G T A C G G T A C A T C G A C T G G T A C A C T G T G A C A G T C G T C A A T C G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCGGCGGCGCCAG
NGCCTGAGGCN----
 A C G T A C G T A G T C G A T C A C T G T A C G G T A C A T C G A C T G G T A C A C T G T G A C A G T C G T C A A T C G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCGGCGGCGCCAG
----CGGAGC---
 A G T C G A T C A C T G T A C G G T A C A T C G A C T G G T A C A C T G T G A C A G T C G T C A A T C G
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCGGCGGCGCCAG
---AGCGCGCC--
 A G T C G A T C A C T G T A C G G T A C A T C G A C T G G T A C A C T G T G A C A G T C G T C A A T C G
A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCGGCGGCGCCAG-
--TTTGGCGCCAAA
 A G T C G A T C A C T G T A C G G T A C A T C G A C T G G T A C A C T G T G A C A G T C G T C A A T C G A C G T
A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A