Information for 16-CAAACCAGTCADA (Motif 24)

A T G C C G T A C G T A C G T A A T G C A G T C C G T A A C T G A G C T A G T C G T C A C G T A C G T A
Reverse Opposite:
A C G T G A C T A C G T C T A G C T G A A G T C A C G T A C T G A T C G A C G T A C G T A C G T A T C G
p-value:1e-9
log p-value:-2.099e+01
Information Content per bp:1.844
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.6 +/- 25.6bp
Average Position of motif in Background39.9 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFCP2/MA0145.3/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAAACCAGTCADA
-AAACCGGTTT--
 A T G C C G T A C G T A C G T A A T G C A G T C C G T A A C T G A G C T A G T C G T C A C G T A C G T A
A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAACCAGTCADA
AAAACCGGTTTT-
 A T G C C G T A C G T A C G T A A T G C A G T C C G T A A C T G A G C T A G T C G T C A C G T A C G T A
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAAACCAGTCADA
-ATGCCAGACN--
 A T G C C G T A C G T A C G T A A T G C A G T C C G T A A C T G A G C T A G T C G T C A C G T A C G T A
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CAAACCAGTCADA
ACTGAAACCA------
 A C G T A C G T A C G T A T G C C G T A C G T A C G T A A T G C A G T C C G T A A C T G A G C T A G T C G T C A C G T A C G T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAAACCAGTCADA--------
-AAACYKGTTWDACMRGTTTB
 A T G C C G T A C G T A C G T A A T G C A G T C C G T A A C T G A G C T A G T C G T C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T G A A T G C G A T C C A T G A C T G G A C T G A C T G C A T C G T A C G T A A G T C G T A C C T G A A T C G G C A T G A C T G A C T A G C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAAACCAGTCADA
AACACCAAAACAAAGGA-
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A A T G C A G T C C G T A A C T G A G C T A G T C G T C A C G T A C G T A
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T

RREB1/MA0073.1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CAAACCAGTCADA----
CCCCAAACCACCCCCCCCCA
 A C G T A C G T A C G T A T G C C G T A C G T A C G T A A T G C A G T C C G T A A C T G A G C T A G T C G T C A C G T A C G T A A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------CAAACCAGTCADA
AAACAGACAAAGGAAT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A A T G C A G T C C G T A A C T G A G C T A G T C G T C A C G T A C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAAACCAGTCADA
CAAATCACTG---
 A T G C C G T A C G T A C G T A A T G C A G T C C G T A A C T G A G C T A G T C G T C A C G T A C G T A
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAAACCAGTCADA--
AAAAACCAATTAAGAA
 A C G T A T G C C G T A C G T A C G T A A T G C A G T C C G T A A C T G A G C T A G T C G T C A C G T A C G T A A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A