Information for 7-GCHGGACGCAGGCACT (Motif 9)

A C T G A G T C G C T A C T A G A C T G T C G A A G T C A C T G A G T C G T C A A T C G A C T G A T G C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A T C G A G T C A T G C A C G T A C T G G T A C A C T G A G C T A G T C A G T C C A G T A C T G A G T C
p-value:1e-10
log p-value:-2.352e+01
Information Content per bp:1.833
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.5 +/- 27.5bp
Average Position of motif in Background42.0 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:1
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCHGGACGCAGGCACT
-ATTGCCTCAGGCAAT
 A C T G A G T C G C T A C T A G A C T G T C G A A G T C A C T G A G T C G T C A A T C G A C T G A T G C C G T A A G T C A C G T
A C G T C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCHGGACGCAGGCACT
AAGGKGRCGCAGGCA--
 A C G T A C T G A G T C G C T A C T A G A C T G T C G A A G T C A C T G A G T C G T C A A T C G A C T G A T G C C G T A A G T C A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GCHGGACGCAGGCACT
----TGCGCAGGCGC-
 A C T G A G T C G C T A C T A G A C T G T C G A A G T C A C T G A G T C G T C A A T C G A C T G A T G C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.51
Offset:9
Orientation:forward strand
Alignment:GCHGGACGCAGGCACT---
---------AAGCACTTAA
 A C T G A G T C G C T A C T A G A C T G T C G A A G T C A C T G A G T C G T C A A T C G A C T G A T G C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GCHGGACGCAGGCACT
---AGCCTCAGGCA--
 A C T G A G T C G C T A C T A G A C T G T C G A A G T C A C T G A G T C G T C A A T C G A C T G A T G C C G T A A G T C A C G T
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GCHGGACGCAGGCACT
-----TBGCACGCAA-
 A C T G A G T C G C T A C T A G A C T G T C G A A G T C A C T G A G T C G T C A A T C G A C T G A T G C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GCHGGACGCAGGCACT
---CGCCTCAGGCA--
 A C T G A G T C G C T A C T A G A C T G T C G A A G T C A C T G A G T C G T C A A T C G A C T G A T G C C G T A A G T C A C G T
A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GCHGGACGCAGGCACT
---AGCCTCAGGCA--
 A C T G A G T C G C T A C T A G A C T G T C G A A G T C A C T G A G T C G T C A A T C G A C T G A T G C C G T A A G T C A C G T
A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.49
Offset:9
Orientation:reverse strand
Alignment:GCHGGACGCAGGCACT---
---------MRSCACTYAA
 A C T G A G T C G C T A C T A G A C T G T C G A A G T C A C T G A G T C G T C A A T C G A C T G A T G C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GCHGGACGCAGGCACT
-NTNGCCTCAGGCNNN
 A C T G A G T C G C T A C T A G A C T G T C G A A G T C A C T G A G T C G T C A A T C G A C T G A T G C C G T A A G T C A C G T
A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T