Information for 4-GCGGCKGAYCCSGCKG (Motif 5)

A C T G A G T C A C T G A C T G A G T C A C T G A C T G G T C A A G C T A G T C A G T C A T C G A C T G A G T C A C T G A C T G
Reverse Opposite:
A G T C G T A C A C T G A G T C A T G C A C T G A C T G T C G A A C G T A G T C G T A C A C T G A G T C A G T C A C T G A G T C
p-value:1e-11
log p-value:-2.580e+01
Information Content per bp:1.895
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 21.6bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGGCKGAYCCSGCKG-
-NNNNTGACCCGGCGCG
 A C T G A G T C A C T G A C T G A G T C A C T G A C T G G T C A A G C T A G T C A G T C A T C G A C T G A G T C A C T G A C T G A C G T
A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCGGCKGAYCCSGCKG
GGGGGCGGGGCC-----
 A C G T A C T G A G T C A C T G A C T G A G T C A C T G A C T G G T C A A G C T A G T C A G T C A T C G A C T G A G T C A C T G A C T G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCGGCKGAYCCSGCKG
-NCGCGGACGTTG---
 A C T G A G T C A C T G A C T G A G T C A C T G A C T G G T C A A G C T A G T C A G T C A T C G A C T G A G T C A C T G A C T G
A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.51
Offset:9
Orientation:forward strand
Alignment:GCGGCKGAYCCSGCKG---
---------CCTGCTGAGH
 A C T G A G T C A C T G A C T G A G T C A C T G A C T G G T C A A G C T A G T C A G T C A T C G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GCGGCKGAYCCSGCKG
GGNGCGNCTGTTNNN----
 A C G T A C G T A C G T A C T G A G T C A C T G A C T G A G T C A C T G A C T G G T C A A G C T A G T C A G T C A T C G A C T G A G T C A C T G A C T G
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GCGGCKGAYCCSGCKG---
----GGCCYCCTGCTGDGH
 A C T G A G T C A C T G A C T G A G T C A C T G A C T G G T C A A G C T A G T C A G T C A T C G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GCGGCKGAYCCSGCKG-
-NNCNTGACCCCGCTCT
 A C T G A G T C A C T G A C T G A G T C A C T G A C T G G T C A A G C T A G T C A G T C A T C G A C T G A G T C A C T G A C T G A C G T
A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCGGCKGAYCCSGCKG
GNNAGCTAATCCCCCN-
 A C G T A C T G A G T C A C T G A C T G A G T C A C T G A C T G G T C A A G C T A G T C A G T C A T C G A C T G A G T C A C T G A C T G
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GCGGCKGAYCCSGCKG
--TGCTGASTCAGC--
 A C T G A G T C A C T G A C T G A G T C A C T G A C T G G T C A A G C T A G T C A G T C A T C G A C T G A G T C A C T G A C T G
A C G T A C G T A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GCGGCKGAYCCSGCKG
RGKGGGCGGAGC------
 A C G T A C G T A C T G A G T C A C T G A C T G A G T C A C T G A C T G G T C A A G C T A G T C A G T C A T C G A C T G A G T C A C T G A C T G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T