Information for 8-TGGGGATTYGYCG (Motif 21)

A G C T A C T G C T A G A T C G A T C G C G T A A C G T A G C T A G T C A T C G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G C T A G A T G C C T A G C T G A C G T A A C G T A T G C A T G C A G T C A G T C C T G A
p-value:1e-7
log p-value:-1.754e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif11.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.3 +/- 19.5bp
Average Position of motif in Background36.1 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0015.1_Crx/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TGGGGATTYGYCG
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T A G C T A C T G C T A G A T C G A T C G C G T A A C G T A G C T A G T C A T C G A G T C A G T C A C T G
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TGGGGATTYGYCG
-GGGGATTCCCCC
 A G C T A C T G C T A G A T C G A T C G C G T A A C G T A G C T A G T C A T C G A G T C A G T C A C T G
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGGGGATTYGYCG
TGGGGA-------
 A G C T A C T G C T A G A T C G A T C G C G T A A C G T A G C T A G T C A T C G A G T C A G T C A C T G
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGGGGATTYGYCG
AGGGGATTCCCCT
 A G C T A C T G C T A G A T C G A T C G C G T A A C G T A G C T A G T C A T C G A G T C A G T C A C T G
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGGGGATTYGYCG
NGGGGATTTCCC-
 A G C T A C T G C T A G A T C G A T C G C G T A A C G T A G C T A G T C A T C G A G T C A G T C A C T G
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGGGGATTYGYCG
NNTGTGGATTSS---
 A C G T A C G T A G C T A C T G C T A G A T C G A T C G C G T A A C G T A G C T A G T C A T C G A G T C A G T C A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGGGGATTYGYCG
AGGGGAATCCCCT
 A G C T A C T G C T A G A T C G A T C G C G T A A C G T A G C T A G T C A T C G A G T C A G T C A C T G
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGGGGATTYGYCG--
AGGGGGATTAGCTGCC
 A C G T A G C T A C T G C T A G A T C G A T C G C G T A A C G T A G C T A G T C A T C G A G T C A G T C A C T G A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGGGATTYGYCG
TGTGGATTNNN--
 A G C T A C T G C T A G A T C G A T C G C G T A A C G T A G C T A G T C A T C G A G T C A G T C A C T G
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGGGGATTYGYCG
-GGGGATTTCC--
 A G C T A C T G C T A G A T C G A T C G C G T A A C G T A G C T A G T C A T C G A G T C A G T C A C T G
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T