Information for 11-CTKCGCGSGARGSCAG (Motif 17)

A G T C A G C T A C G T A G T C A T C G G T A C A C T G A T G C T A C G T G C A T C A G A C T G T A C G G T A C C G T A A T C G
Reverse Opposite:
A T G C G C A T A C T G A T G C A G T C A G T C A C G T A T G C A T C G G T A C A C T G A T G C A C T G G T C A C T G A A C T G
p-value:1e-8
log p-value:-1.999e+01
Information Content per bp:1.755
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 22.7bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTKCGCGSGARGSCAG
TTTTCGCGCGAA-----
 A C G T A G T C A G C T A C G T A G T C A T C G G T A C A C T G A T G C T A C G T G C A T C A G A C T G T A C G G T A C C G T A A T C G
G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTKCGCGSGARGSCAG
GCTTCC-----------
 A C G T A G T C A G C T A C G T A G T C A T C G G T A C A C T G A T G C T A C G T G C A T C A G A C T G T A C G G T A C C G T A A T C G
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTKCGCGSGARGSCAG
--GGGCGGGAAGG---
 A G T C A G C T A C G T A G T C A T C G G T A C A C T G A T G C T A C G T G C A T C A G A C T G T A C G G T A C C G T A A T C G
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTKCGCGSGARGSCAG
NCTTCCNGGAAGNN---
 A C G T A G T C A G C T A C G T A G T C A T C G G T A C A C T G A T G C T A C G T G C A T C A G A C T G T A C G G T A C C G T A A T C G
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTKCGCGSGARGSCAG
CTTCGCGGGGGGTC--
 A G T C A G C T A C G T A G T C A T C G G T A C A C T G A T G C T A C G T G C A T C A G A C T G T A C G G T A C C G T A A T C G
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CTKCGCGSGARGSCAG
NNGCNCTGCGCGGC-------
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T A C G T A G T C A T C G G T A C A C T G A T G C T A C G T G C A T C A G A C T G T A C G G T A C C G T A A T C G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTKCGCGSGARGSCAG
--CCGCCCAAGGGCAG
 A G T C A G C T A C G T A G T C A T C G G T A C A C T G A T G C T A C G T G C A T C A G A C T G T A C G G T A C C G T A A T C G
A C G T A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTKCGCGSGARGSCAG
CTTCCNGGAA------
 A G T C A G C T A C G T A G T C A T C G G T A C A C T G A T G C T A C G T G C A T C A G A C T G T A C G G T A C C G T A A T C G
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTKCGCGSGARGSCAG
VDTTTCCCGCCA------
 A C G T A C G T A G T C A G C T A C G T A G T C A T C G G T A C A C T G A T G C T A C G T G C A T C A G A C T G T A C G G T A C C G T A A T C G
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTKCGCGSGARGSCAG
---GGCGGGAARN---
 A G T C A G C T A C G T A G T C A T C G G T A C A C T G A T G C T A C G T G C A T C A G A C T G T A C G G T A C C G T A A T C G
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T