Information for 3-TGGCGCTGTCCAC (Motif 13)

A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T A G T C A G T C T C G A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G C G T A A G T C C G T A A C T G G T A C A C T G A G T C A G T C G T C A
p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.4 +/- 8.6bp
Average Position of motif in Background66.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGGCGCTGTCCAC---------
-GGCGCTGTCCATGGTGCTGAA
 A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T A G T C A G T C T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGGCGCTGTCCAC--------
-GGAGCTGTCCATGGTGCTGA
 A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T A G T C A G T C T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCGCTGTCCAC
NNNNTTGGCGCCGANNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T A G T C A G T C T C G A A G T C
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGGCGCTGTCCAC
----GCTGTCAA-
 A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T A G T C A G T C T C G A A G T C
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGGCGCTGTCCAC--
GGGCGATGACCAYTC
 A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T A G T C A G T C T C G A A G T C A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGGCGCTGTCCAC---
----SCTGTCARCACC
 A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T A G T C A G T C T C G A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCGCTGTCCAC
NNNNTTGGCGCCGANNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T A G T C A G T C T C G A A G T C
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGGCGCTGTCCAC
----GCTGTG---
 A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T A G T C A G T C T C G A A G T C
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGCGCTGTCCAC
-GGCGCGCT----
 A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T A G T C A G T C T C G A A G T C
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TGGCGCTGTCCAC
----CCTGTCAA-
 A C G T A C T G A C T G A G T C A C T G A G T C A C G T A C T G A C G T A G T C A G T C T C G A A G T C
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T