Information for 3-AAAMACASCG (Motif 14)

G T C A C G T A C T G A G T C A C G T A G T A C C T G A A T G C G A T C C T A G
Reverse Opposite:
A G T C C T A G A T C G A G C T A C T G G C A T A C G T A G C T A C G T A C G T
p-value:1e-9
log p-value:-2.186e+01
Information Content per bp:1.728
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif6.72%
Number of Background Sequences with motif1083.2
Percentage of Background Sequences with motif2.22%
Average Position of motif in Targets54.7 +/- 28.0bp
Average Position of motif in Background49.8 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------AAAMACASCG
CAAAAGTAAACAAAG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C T G A G T C A C G T A G T A C C T G A A T G C G A T C C T A G
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAAMACASCG
AAACCACAGC-
 A C G T G T C A C G T A C T G A G T C A C G T A G T A C C T G A A T G C G A T C C T A G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAMACASCG
AAATCACAGCA
 A C G T G T C A C G T A C T G A G T C A C G T A G T A C C T G A A T G C G A T C C T A G
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAAMACASCG
AAATCACTGC-
 A C G T G T C A C G T A C T G A G T C A C G T A G T A C C T G A A T G C G A T C C T A G
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAAMACASCG
AAACCACANN-
 A C G T G T C A C G T A C T G A G T C A C G T A G T A C C T G A A T G C G A T C C T A G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAAMACASCG
NAAACCACAG--
 A C G T A C G T G T C A C G T A C T G A G T C A C G T A G T A C C T G A A T G C G A T C C T A G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AAAMACASCG
AAGTAAACAAA---
 A C G T A C G T A C G T A C G T G T C A C G T A C T G A G T C A C G T A G T A C C T G A A T G C G A T C C T A G
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AAAMACASCG
CAAACAACAACACCT
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A C T G A G T C A C G T A G T A C C T G A A T G C G A T C C T A G
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAAMACASCG
GTAAACA-----
 A C G T A C G T G T C A C G T A C T G A G T C A C G T A G T A C C T G A A T G C G A T C C T A G
C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AAAMACASCG-
AAAGTAAACAAAAATT
 A C G T A C G T A C G T A C G T A C G T G T C A C G T A C T G A G T C A C G T A G T A C C T G A A T G C G A T C C T A G A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T