Information for 6-GTCAGHCTGAAVGCGG (Motif 10)

A T C G A G C T A G T C C G T A A C T G G T A C G T A C G A C T A C T G C G T A C G T A T A C G C A T G T A G C A T C G A C T G
Reverse Opposite:
G T A C A T G C A T C G G T A C A T G C A C G T A C G T G T A C C T G A A C T G C A T G A G T C C G A T C T A G C T G A A T G C
p-value:1e-11
log p-value:-2.648e+01
Information Content per bp:1.741
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.2 +/- 9.6bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTCAGHCTGAAVGCGG
BAGTCATANTGAAAG---
 A C G T A C G T A T C G A G C T A G T C C G T A A C T G G T A C G T A C G A C T A C T G C G T A C G T A T A C G C A T G T A G C A T C G A C T G
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGHCTGAAVGCGG
WNAGTCADAVTGAAACTN-
 A C G T A C G T A C G T A T C G A G C T A G T C C G T A A C T G G T A C G T A C G A C T A C T G C G T A C G T A T A C G C A T G T A G C A T C G A C T G
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTCAGHCTGAAVGCGG--
-NTTNTATGAATGTGNNC
 A T C G A G C T A G T C C G T A A C T G G T A C G T A C G A C T A C T G C G T A C G T A T A C G C A T G T A G C A T C G A C T G A C G T A C G T
A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTCAGHCTGAAVGCGG----
SMCAGTCWGAKGGAGGAGGC
 A T C G A G C T A G T C C G T A A C T G G T A C G T A C G A C T A C T G C G T A C G T A T A C G C A T G T A G C A T C G A C T G A C G T A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTCAGHCTGAAVGCGG
NAGGTCACNNTGACC----
 A C G T A C G T A C G T A T C G A G C T A G T C C G T A A C T G G T A C G T A C G A C T A C T G C G T A C G T A T A C G C A T G T A G C A T C G A C T G
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GTCAGHCTGAAVGCGG
-----ACTGAAACCA-
 A T C G A G C T A G T C C G T A A C T G G T A C G T A C G A C T A C T G C G T A C G T A T A C G C A T G T A G C A T C G A C T G
A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GTCAGHCTGAAVGCGG
--TWGTCTGV------
 A T C G A G C T A G T C C G T A A C T G G T A C G T A C G A C T A C T G C G T A C G T A T A C G C A T G T A G C A T C G A C T G
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTCAGHCTGAAVGCGG
NNTNTCATGAATGT--
 A T C G A G C T A G T C C G T A A C T G G T A C G T A C G A C T A C T G C G T A C G T A T A C G C A T G T A G C A T C G A C T G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GTCAGHCTGAAVGCGG
--NNNANTGA------
 A T C G A G C T A G T C C G T A A C T G G T A C G T A C G A C T A C T G C G T A C G T A T A C G C A T G T A G C A T C G A C T G
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GTCAGHCTGAAVGCGG
ACTATGAATGAATGAT-
 A C G T A T C G A G C T A G T C C G T A A C T G G T A C G T A C G A C T A C T G C G T A C G T A T A C G C A T G T A G C A T C G A C T G
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T