Information for 8-CATCACTGTWARACTC (Motif 9)

G T A C G T C A A G C T A T G C C T G A A G T C A G C T A C T G G C A T G C A T T G C A C T A G G C T A G A T C A C G T G T A C
Reverse Opposite:
A C T G C G T A C T A G C G A T A G T C A C G T C G T A C G T A T G A C C T G A A C T G A G C T A T C G T C G A A C G T A C T G
p-value:1e-11
log p-value:-2.544e+01
Information Content per bp:1.697
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif51.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets56.7 +/- 25.9bp
Average Position of motif in Background49.2 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CATCACTGTWARACTC
CAATCACTGGCAGAAT-
 A C G T G T A C G T C A A G C T A T G C C T G A A G T C A G C T A C T G G C A T G C A T T G C A C T A G G C T A G A T C A C G T G T A C
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CATCACTGTWARACTC
MRSCACTYAA------
 G T A C G T C A A G C T A T G C C T G A A G T C A G C T A C T G G C A T G C A T T G C A C T A G G C T A G A T C A C G T G T A C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CATCACTGTWARACTC
TCACCCATCAATAAACA----
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A A G C T A T G C C T G A A G T C A G C T A C T G G C A T G C A T T G C A C T A G G C T A G A T C A C G T G T A C
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CATCACTGTWARACTC
NNNNTGAGCACTGTNNG----
 A C G T A C G T A C G T A C G T A C G T G T A C G T C A A G C T A T G C C T G A A G T C A G C T A C T G G C A T G C A T T G C A C T A G G C T A G A T C A C G T G T A C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CATCACTGTWARACTC
-ACCACTTGAA-----
 G T A C G T C A A G C T A T G C C T G A A G T C A G C T A C T G G C A T G C A T T G C A C T A G G C T A G A T C A C G T G T A C
A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CATCACTGTWARACTC
CATAACCACTTAACAAC--
 A C G T A C G T A C G T G T A C G T C A A G C T A T G C C T G A A G T C A G C T A C T G G C A T G C A T T G C A C T A G G C T A G A T C A C G T G T A C
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CATCACTGTWARACTC
-ACCACTTAA------
 G T A C G T C A A G C T A T G C C T G A A G T C A G C T A C T G G C A T G C A T T G C A C T A G G C T A G A T C A C G T G T A C
A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CATCACTGTWARACTC
-ACCACTTAA------
 G T A C G T C A A G C T A T G C C T G A A G T C A G C T A C T G G C A T G C A T T G C A C T A G G C T A G A T C A C G T G T A C
A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CATCACTGTWARACTC
AAGCACTTAA------
 G T A C G T C A A G C T A T G C C T G A A G T C A G C T A C T G G C A T G C A T T G C A C T A G G C T A G A T C A C G T G T A C
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CATCACTGTWARACTC
--CCACTTGAA-----
 G T A C G T C A A G C T A T G C C T G A A G T C A G C T A C T G G C A T G C A T T G C A C T A G G C T A G A T C A C G T G T A C
A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T A C G T