Information for 3-CTGYTAAATTTACTGT (Motif 3)

A G T C A C G T A T C G G A C T A C G T G C T A G T C A G C T A A C G T A C G T G A C T G T C A T G A C A C G T C A T G A C G T
Reverse Opposite:
C G T A G T A C C G T A A C T G A C G T C G T A G T C A C G T A C G A T A C G T C G A T C G T A C T G A A T G C C G T A A C T G
p-value:1e-14
log p-value:-3.388e+01
Information Content per bp:1.787
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.7 +/- 19.2bp
Average Position of motif in Background66.9 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CTGYTAAATTTACTGT-
-------ATTTCCTGTN
 A G T C A C G T A T C G G A C T A C G T G C T A G T C A G C T A A C G T A C G T G A C T G T C A T G A C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CTGYTAAATTTACTGT-
-------ATTTCCTGTN
 A G T C A C G T A T C G G A C T A C G T G C T A G T C A G C T A A C G T A C G T G A C T G T C A T G A C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

PH0128.1_Otp/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGYTAAATTTACTGT-
CNNATTAATTAATTNNN
 A G T C A C G T A T C G G A C T A C G T G C T A G T C A G C T A A C G T A C G T G A C T G T C A T G A C A C G T C A T G A C G T A C G T
G T A C G T A C G T C A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C G A T C T G A A G T C A C T G

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CTGYTAAATTTACTGT
AAAGCTCGTAAAATTT----
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G G A C T A C G T G C T A G T C A G C T A A C G T A C G T G A C T G T C A T G A C A C G T C A T G A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGYTAAATTTACTGT
NNNNTGAATTCANNNC
 A G T C A C G T A T C G G A C T A C G T G C T A G T C A G C T A A C G T A C G T G A C T G T C A T G A C A C G T C A T G A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PH0132.1_Pax6/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTGYTAAATTTACTGT-
-TGATTAATTAATTGAC
 A G T C A C G T A T C G G A C T A C G T G C T A G T C A G C T A A C G T A C G T G A C T G T C A T G A C A C G T C A T G A C G T A C G T
A C G T A G C T C T A G T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T A C G T T A C G C G T A G T A C

PH0176.1_Vsx1/Jaspar

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CTGYTAAATTTACTGT
ANTNATTAATTAACTNG
 A C G T A G T C A C G T A T C G G A C T A C G T G C T A G T C A G C T A A C G T A C G T G A C T G T C A T G A C A C G T C A T G A C G T
T C G A C G T A A C G T G A C T C T G A G A C T G A C T G T C A C G T A G A C T A C G T C T G A C T G A G A T C C A G T A T G C C A T G

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CTGYTAAATTTACTGT
AAACCTCGTAAAATTT----
 A C G T A C G T A C G T A C G T A G T C A C G T A T C G G A C T A C G T G C T A G T C A G C T A A C G T A C G T G A C T G T C A T G A C A C G T C A T G A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:CTGYTAAATTTACTGT-
-------ACTTCCTGTT
 A G T C A C G T A T C G G A C T A C G T G C T A G T C A G C T A A C G T A C G T G A C T G T C A T G A C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTGYTAAATTTACTGT
-TGTTTACTTT-----
 A G T C A C G T A T C G G A C T A C G T G C T A G T C A G C T A A C G T A C G T G A C T G T C A T G A C A C G T C A T G A C G T
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T