Information for 5-CACTGCATGC (Motif 29)

A G T C G T C A A G T C A C G T A C T G A G T C C G T A A G C T A T C G A G T C
Reverse Opposite:
C T A G A T G C C T G A A C G T A C T G A G T C C G T A A C T G A C G T A C T G
p-value:1e-7
log p-value:-1.701e+01
Information Content per bp:1.908
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif86.2
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets49.7 +/- 33.2bp
Average Position of motif in Background51.4 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.87
Offset:-5
Orientation:forward strand
Alignment:-----CACTGCATGC--
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C A C G T A C T G A G T C C G T A A G C T A T C G A G T C A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CACTGCATGC--
GAGCACAGCAGGACA
 A C G T A C G T A C G T A G T C G T C A A G T C A C G T A C T G A G T C C G T A A G C T A T C G A G T C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACTGCATGC--
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C G T C A A G T C A C G T A C T G A G T C C G T A A G C T A T C G A G T C A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACTGCATGC--
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C G T C A A G T C A C G T A C T G A G T C C G T A A G C T A T C G A G T C A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CACTGCATGC
DCTCAGCAGG-
 A C G T A G T C G T C A A G T C A C G T A C T G A G T C C G T A A G C T A T C G A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CACTGCATGC
NSCACTYVAV--
 A C G T A C G T A G T C G T C A A G T C A C G T A C T G A G T C C G T A A G C T A T C G A G T C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CACTGCATGC
GGGATTGCATNN
 A C G T A C G T A G T C G T C A A G T C A C G T A C T G A G T C C G T A A G C T A T C G A G T C
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CACTGCATGC--
CACAGCAGGGGG
 A G T C G T C A A G T C A C G T A C T G A G T C C G T A A G C T A T C G A G T C A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACTGCATGC
CACTTCCTGT
 A G T C G T C A A G T C A C G T A C T G A G T C C G T A A G C T A T C G A G T C
A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CACTGCATGC
CCACTTGAA--
 A C G T A G T C G T C A A G T C A C G T A C T G A G T C C G T A A G C T A T C G A G T C
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T