Information for 13-GTCAACAARGRYTRKW (Motif 21)

A C T G A C G T A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C T G C T A G A G C T A C G T C T G A C A T G G C T A
Reverse Opposite:
C G A T G T A C G A C T G T C A C T G A A G T C A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C T G C G T A A G T C
p-value:1e-8
log p-value:-2.043e+01
Information Content per bp:1.839
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.8 +/- 16.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxj2/MA0614.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GTCAACAARGRYTRKW
GTAAACAA--------
 A C T G A C G T A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C T G C T A G A G C T A C G T C T G A C A T G G C T A
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GTCAACAARGRYTRKW
TATGTAAACANG-------
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C T G C T A G A G C T A C G T C T G A C A T G G C T A
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GTCAACAARGRYTRKW
AAAGTAAACAAAAATT---
 A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C T G C T A G A G C T A C G T C T G A C A T G G C T A
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GTCAACAARGRYTRKW
---AACAAAGG-----
 A C T G A C G T A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C T G C T A G A G C T A C G T C T G A C A T G G C T A
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GTCAACAARGRYTRKW
AAAAAGTAAACAAACAC----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C T G C T A G A G C T A C G T C T G A C A T G G C T A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T A C G T A C G T A C G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GTCAACAARGRYTRKW
AAAAAGTAAACAAACAC----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C T G C T A G A G C T A C G T C T G A C A T G G C T A
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T A C G T A C G T A C G T

FOXO3/MA0157.2/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTCAACAARGRYTRKW
GTAAACAA--------
 A C T G A C G T A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C T G C T A G A G C T A C G T C T G A C A T G G C T A
C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GTCAACAARGRYTRKW
AAAATGTAAACAAACAG----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C T G C T A G A G C T A C G T C T G A C A T G G C T A
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G A C G T A C G T A C G T A C G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GTCAACAARGRYTRKW
AAAATGTAAACAAACAG----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C T G C T A G A G C T A C G T C T G A C A T G G C T A
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G A C G T A C G T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:10
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAACAARGRYTRKW
NCWRWGTAAACANSV------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A G T C C G T A C G T A C T G A A C T G C T A G A G C T A C G T C T G A C A T G G C T A
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G A C G T A C G T A C G T A C G T A C G T A C G T