p-value: | 1e-9 |
log p-value: | -2.290e+01 |
Information Content per bp: | 1.842 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.75% |
Number of Background Sequences with motif | 2.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 53.2 +/- 20.2bp |
Average Position of motif in Background | 56.1 +/- 21.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.7 |
Multiplicity (# of sites on avg that occur together) | 1.20 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0034.1_Gbx2/Jaspar
Match Rank: | 1 |
Score: | 0.57 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AAATTAGTCACTAAWT------ -----AANCGCTAATTAGCNNN |
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MF0010.1_Homeobox_class/Jaspar
Match Rank: | 2 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AAATTAGTCACTAAWT -AATTATT-------- |
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PH0124.1_Obox5_1/Jaspar
Match Rank: | 3 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAATTAGTCACTAAWT NANANTTAATCCCNNNN- |
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PH0132.1_Pax6/Jaspar
Match Rank: | 4 |
Score: | 0.54 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------AAATTAGTCACTAAWT GNNAATTAATTAATCA------ |
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VSX2/MA0726.1/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 10 |
Orientation: | forward strand |
Alignment: | AAATTAGTCACTAAWT-- ----------CTAATTAG |
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LHX2/MA0700.1/Jaspar
Match Rank: | 6 |
Score: | 0.54 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | AAATTAGTCACTAAWT--- ---------ACTAATTAAC |
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PH0029.1_En2/Jaspar
Match Rank: | 7 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AAATTAGTCACTAAWT------ -----NTNCACTAATTAGNGCA |
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PH0155.1_Prrx2/Jaspar
Match Rank: | 8 |
Score: | 0.53 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AAATTAGTCACTAAWT------ -----NTTCGCTAATTAGCTNT |
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PH0033.1_Gbx1/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----AAATTAGTCACTAAWT TNCACTAATTAGTNNNN---- |
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PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
Match Rank: | 10 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AAATTAGTCACTAAWT NNAATTAGTCACGGT-- |
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