Information for 1-AAAGCAAACT (Motif 10)

T G C A T G C A C T G A A C T G G T A C G T C A G T C A G T C A G A T C A G C T
Reverse Opposite:
C T G A C T A G C A G T C A G T C A G T C A T G T G A C G A C T A C G T A C G T
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.653
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif9.50%
Number of Background Sequences with motif1807.6
Percentage of Background Sequences with motif3.67%
Average Position of motif in Targets46.0 +/- 26.9bp
Average Position of motif in Background50.9 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAGCAAACT-
GAGAACCGAAACTG
 A C G T A C G T A C G T T G C A T G C A C T G A A C T G G T A C G T C A G T C A G T C A G A T C A G C T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAAGCAAACT
AAAGTAAACA
 T G C A T G C A C T G A A C T G G T A C G T C A G T C A G T C A G A T C A G C T
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAAGCAAACT
AAAGTAAACA
 T G C A T G C A C T G A A C T G G T A C G T C A G T C A G T C A G A T C A G C T
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAAGCAAACT
GAAAMTGAAACT
 A C G T A C G T T G C A T G C A C T G A A C T G G T A C G T C A G T C A G T C A G A T C A G C T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAAGCAAACT
WAAGTAAAYA
 T G C A T G C A C T G A A C T G G T A C G T C A G T C A G T C A G A T C A G C T
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AAAGCAAACT--
GGAAANTGAAACTNA
 A C G T A C G T A C G T T G C A T G C A C T G A A C T G G T A C G T C A G T C A G T C A G A T C A G C T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAAGCAAACT----
CAAAGTAAACANNNN
 A C G T T G C A T G C A C T G A A C T G G T A C G T C A G T C A G T C A G A T C A G C T A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAAGCAAACT
AGAAACGAAAGT
 A C G T A C G T T G C A T G C A C T G A A C T G G T A C G T C A G T C A G T C A G A T C A G C T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAAGCAAACT--
CAAAATCGAAACTAA
 A C G T A C G T A C G T T G C A T G C A C T G A A C T G G T A C G T C A G T C A G T C A G A T C A G C T A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AAAGCAAACT--
TGCCAAAATAAACANN
 A C G T A C G T A C G T A C G T T G C A T G C A C T G A A C T G G T A C G T C A G T C A G T C A G A T C A G C T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A