Information for 2-ATGGCACCTGTCC (Motif 4)

C G T A A C G T A C T G A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G C T A G T C A G T C
Reverse Opposite:
A C T G A C T G C T G A A T G C C G T A A C T G C T A G A C G T A C T G A G T C A G T C C G T A A C G T
p-value:1e-10
log p-value:-2.524e+01
Information Content per bp:1.941
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.5 +/- 13.1bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX2/MA0783.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ATGGCACCTGTCC
-TGACACCTGTCA
 C G T A A C G T A C T G A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G C T A G T C A G T C
A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

PKNOX1/MA0782.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ATGGCACCTGTCC
-TGACACCTGTCA
 C G T A A C G T A C T G A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G C T A G T C A G T C
A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

ID4/MA0824.1/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ATGGCACCTGTCC
--TACACCTGTC-
 C G T A A C G T A C T G A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G C T A G T C A G T C
A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATGGCACCTGTCC
-TGACAGCTGTCA
 C G T A A C G T A C T G A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G C T A G T C A G T C
A C G T G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:ATGGCACCTGTCC
---NCACCTGTN-
 C G T A A C G T A C T G A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G C T A G T C A G T C
A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATGGCACCTGTCC
-TGACACCT----
 C G T A A C G T A C T G A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G C T A G T C A G T C
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATGGCACCTGTCC
-TGACAGCTGTCA
 C G T A A C G T A C T G A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G C T A G T C A G T C
A C G T G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATGGCACCTGTCC
-SNGCACCTGCHS
 C G T A A C G T A C T G A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G C T A G T C A G T C
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

HES5/MA0821.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATGGCACCTGTCC
-TGGCACGTGCCG
 C G T A A C G T A C T G A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G C T A G T C A G T C
A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATGGCACCTGTCC--
--TGCAGCTGTCCCT
 C G T A A C G T A C T G A C T G A G T C G T C A A G T C A G T C A C G T A T C G A G C T A G T C A G T C A C G T A C G T
A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T