Information for 15-CTCATGGGCRTCTGCY (Motif 19)

A G T C A C G T A T G C G T C A A C G T C A T G A C T G A T C G A G T C C T G A A C G T G A T C C G A T A T C G A G T C A G C T
Reverse Opposite:
T C G A A C T G A T G C C G T A C T A G T C G A G A C T C T A G A T G C A G T C G A T C C G T A A C G T T A C G C G T A A C T G
p-value:1e-12
log p-value:-2.951e+01
Information Content per bp:1.734
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.5 +/- 24.9bp
Average Position of motif in Background43.5 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTCATGGGCRTCTGCY-
---CTGGCAGNCTGCCA
 A G T C A C G T A T G C G T C A A C G T C A T G A C T G A T C G A G T C C T G A A C G T G A T C C G A T A T C G A G T C A G C T A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCATGGGCRTCTGCY-
CAKCTGKYCYYTTYCCC
 A G T C A C G T A T G C G T C A A C G T C A T G A C T G A T C G A G T C C T G A A C G T G A T C C G A T A T C G A G T C A G C T A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCATGGGCRTCTGCY
CCGATTGGCT------
 A G T C A C G T A T G C G T C A A C G T C A T G A C T G A T C G A G T C C T G A A C G T G A T C C G A T A T C G A G T C A G C T
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCATGGGCRTCTGCY
CTGATTGGTCNATTT-
 A G T C A C G T A T G C G T C A A C G T C A T G A C T G A T C G A G T C C T G A A C G T G A T C C G A T A T C G A G T C A G C T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTCATGGGCRTCTGCY--
--CTTGGCANNNTGCCAA
 A G T C A C G T A T G C G T C A A C G T C A T G A C T G A T C G A G T C C T G A A C G T G A T C C G A T A T C G A G T C A G C T A C G T A C G T
A C G T A C G T A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CTCATGGGCRTCTGCY-
-----SNGCACCTGCHS
 A G T C A C G T A T G C G T C A A C G T C A T G A C T G A T C G A G T C C T G A A C G T G A T C C G A T A T C G A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTCATGGGCRTCTGCY
------GCCATCTGTT
 A G T C A C G T A T G C G T C A A C G T C A T G A C T G A T C G A G T C C T G A A C G T G A T C C G A T A T C G A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTCATGGGCRTCTGCY
GTTAATGGCC-------
 A C G T A G T C A C G T A T G C G T C A A C G T C A T G A C T G A T C G A G T C C T G A A C G T G A T C C G A T A T C G A G T C A G C T
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CTCATGGGCRTCTGCY--
------GCCAGCTGBTNB
 A G T C A C G T A T G C G T C A A C G T C A T G A C T G A T C G A G T C C T G A A C G T G A T C C G A T A T C G A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CTCATGGGCRTCTGCY--
------NVCAGCTGBBNN
 A G T C A C G T A T G C G T C A A C G T C A T G A C T G A T C G A G T C C T G A A C G T G A T C C G A T A T C G A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C