Information for 5-TCYCCATGAAAAC (Motif 12)

A C G T G A T C A G C T A T G C A G T C C G T A C A G T A C T G G C T A C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G C G A T A C G T A C G T C G A T G T A C G C T A A C G T C T A G T A C G C T G A C A T G G T C A
p-value:1e-8
log p-value:-2.066e+01
Information Content per bp:1.767
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.2 +/- 19.1bp
Average Position of motif in Background49.1 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCYCCATGAAAAC-
TTGCCATGGCAACC
 A C G T G A T C A G C T A T G C A G T C C G T A C A G T A C T G G C T A C G T A C G T A C G T A A G T C A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

FOXP2/MA0593.1/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TCYCCATGAAAAC---
-----AAGTAAACAAA
 A C G T G A T C A G C T A T G C A G T C C G T A C A G T A C T G G C T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCYCCATGAAAAC
---CCAATAAAAC
 A C G T G A T C A G C T A T G C A G T C C G T A C A G T A C T G G C T A C G T A C G T A C G T A A G T C
A C G T A C G T A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TCYCCATGAAAAC----
-----ATGTAAACADGS
 A C G T G A T C A G C T A T G C A G T C C G T A C A G T A C T G G C T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

HOXD13/MA0909.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCYCCATGAAAAC
---CCAATAAAAA
 A C G T G A T C A G C T A T G C A G T C C G T A C A G T A C T G G C T A C G T A C G T A C G T A A G T C
A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCYCCATGAAAAC-
--NCTAAGTAAACA
 A C G T G A T C A G C T A T G C A G T C C G T A C A G T A C T G G C T A C G T A C G T A C G T A A G T C A C G T
A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

HOXA13/MA0650.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCYCCATGAAAAC
---CCAATAAAAA
 A C G T G A T C A G C T A T G C A G T C C G T A C A G T A C T G G C T A C G T A C G T A C G T A A G T C
A C G T A C G T A C G T T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TCYCCATGAAAAC-
----AAAGTAAACA
 A C G T G A T C A G C T A T G C A G T C C G T A C A G T A C T G G C T A C G T A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCYCCATGAAAAC
--NCYAATAAAA-
 A C G T G A T C A G C T A T G C A G T C C G T A C A G T A C T G G C T A C G T A C G T A C G T A A G T C
A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:10
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCYCCATGAAAAC-----
---CAAAGTAAACANNNN
 A C G T G A T C A G C T A T G C A G T C C G T A C A G T A C T G G C T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A