Information for 4-AAAAATTTGTTCA (Motif 4)

C G T A C G T A C T G A C G T A G T C A G A C T G A C T A C G T A C T G A C G T A C G T A G T C G T C A
Reverse Opposite:
A C G T A C T G G T C A C G T A A G T C C G T A C G T A C G T A A C G T C G A T A G C T A C G T A C G T
p-value:1e-15
log p-value:-3.659e+01
Information Content per bp:1.820
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.6 +/- 29.3bp
Average Position of motif in Background69.4 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAAAATTTGTTCA---
AANTTATTGTTCTNNA
 C G T A C G T A C T G A C G T A G T C A G A C T G A C T A C G T A C T G A C G T A C G T A G T C G T C A A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAAAATTTGTTCA
AAGAACATWHTGTTC-
 A C G T A C G T A C G T C G T A C G T A C T G A C G T A G T C A G A C T G A C T A C G T A C T G A C G T A C G T A G T C G T C A
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAAATTTGTTCA---
GGAAAAATTGTTAGGAA
 A C G T C G T A C G T A C T G A C G T A G T C A G A C T G A C T A C G T A C T G A C G T A C G T A G T C G T C A A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

BHLHE23/MA0817.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAAATTTGTTCA
AAACATATGTTT-
 C G T A C G T A C T G A C G T A G T C A G A C T G A C T A C G T A C T G A C G T A C G T A G T C G T C A
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAAAATTTGTTCA---
NNTTTATTGTTCTNNN
 C G T A C G T A C T G A C G T A G T C A G A C T G A C T A C G T A C T G A C G T A C G T A G T C G T C A A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAAAATTTGTTCA----
-NNNNTTTGTTTACNNT
 C G T A C G T A C T G A C G T A G T C A G A C T G A C T A C G T A C T G A C G T A C G T A G T C G T C A A C G T A C G T A C G T A C G T
A C G T G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AAAAATTTGTTCA
-----ATTGTT--
 C G T A C G T A C T G A C G T A G T C A G A C T G A C T A C G T A C T G A C G T A C G T A G T C G T C A
A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAAAATTTGTTCA---
ANNTCTATTGTTCNNNA
 A C G T C G T A C G T A C T G A C G T A G T C A G A C T G A C T A C G T A C T G A C G T A C G T A G T C G T C A A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

MYF6/MA0667.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAAAATTTGTTCA
-AACAGCTGTT--
 C G T A C G T A C T G A C G T A G T C A G A C T G A C T A C G T A C T G A C G T A C G T A G T C G T C A
A C G T T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAAATTTGTTCA-
TATAAGTAGGTCAA
 C G T A C G T A C T G A C G T A G T C A G A C T G A C T A C G T A C T G A C G T A C G T A G T C G T C A A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A