p-value: | 1e-7 |
log p-value: | -1.733e+01 |
Information Content per bp: | 1.774 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.85% |
Number of Background Sequences with motif | 11.6 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 47.3 +/- 34.3bp |
Average Position of motif in Background | 53.0 +/- 19.6bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Arid5a/MA0602.1/Jaspar
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TVAATATTTGAHTTDB NNTNNCAATATTAG------ |
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PB0002.1_Arid5a_1/Jaspar
Match Rank: | 2 |
Score: | 0.69 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TVAATATTTGAHTTDB NNTNNCAATATTAG------ |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TVAATATTTGAHTTDB ATGAATATTC------- |
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Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TVAATATTTGAHTTDB TTAATGTTTAACC--- |
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POU4F1/MA0790.1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TVAATATTTGAHTTDB ATGAATAATTAATG--- |
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MF0010.1_Homeobox_class/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TVAATATTTGAHTTDB --AATAATT------- |
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HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TVAATATTTGAHTTDB TTAATNATTAAC---- |
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POU4F3/MA0791.1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TVAATATTTGAHTTDB ATGCATAATTAATGAG- |
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Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TVAATATTTGAHTTDB ATGCATAATTCA----- |
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HNF1A/MA0046.2/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TVAATATTTGAHTTDB NGTTAATNATTAACN--- |
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