Information for 8-GCCTGGCAGG (Motif 21)

C T A G G T A C G T A C G A C T A T C G T A C G T G A C C G T A C A T G A C T G
Reverse Opposite:
T G A C G T A C G C A T A C T G A T G C T A G C C T G A C A T G C A T G G A T C
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.655
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif7.32%
Number of Background Sequences with motif1326.4
Percentage of Background Sequences with motif2.91%
Average Position of motif in Targets53.2 +/- 25.9bp
Average Position of motif in Background49.9 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GCCTGGCAGG
-CTTGGCAA-
 C T A G G T A C G T A C G A C T A T C G T A C G T G A C C G T A C A T G A C T G
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCTGGCAGG
VGCTGWCAVB
 C T A G G T A C G T A C G A C T A T C G T A C G T G A C C G T A C A T G A C T G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCCTGGCAGG
-NTTGGCANN
 C T A G G T A C G T A C G A C T A T C G T A C G T G A C C G T A C A T G A C T G
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCTGGCAGG
GGTCTGGCAT-
 A C G T C T A G G T A C G T A C G A C T A T C G T A C G T G A C C G T A C A T G A C T G
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCCTGGCAGG
--TTGGCA--
 C T A G G T A C G T A C G A C T A T C G T A C G T G A C C G T A C A T G A C T G
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCTGGCAGG--
GGGGCTYGKCTGGGA
 A C G T A C G T A C G T C T A G G T A C G T A C G A C T A T C G T A C G T G A C C G T A C A T G A C T G A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCTGGCAGG
TNNGGGCAG-
 C T A G G T A C G T A C G A C T A T C G T A C G T G A C C G T A C A T G A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCCTGGCAGG
--TTGACAGC
 C T A G G T A C G T A C G A C T A T C G T A C G T G A C C G T A C A T G A C T G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCTGGCAGG
GGTTGGCAT-
 C T A G G T A C G T A C G A C T A T C G T A C G T G A C C G T A C A T G A C T G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGGCAGG
BTGABTGACAGS
 A C G T A C G T C T A G G T A C G T A C G A C T A T C G T A C G T G A C C G T A C A T G A C T G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C