Information for 3-TGAKTAWAAACMACTA (Motif 3)

C G A T C A T G C G T A C A G T C G A T C T G A G C T A C G T A G T C A C T G A A G T C G T C A G T C A A T G C A C G T G T C A
Reverse Opposite:
A C G T G T C A A T C G A C G T C A G T A C T G G A C T A C G T A C G T C G A T A G C T G C T A G T C A A C G T G A T C C G T A
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.675
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.6 +/- 26.0bp
Average Position of motif in Background34.9 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGAKTAWAAACMACTA
--WWTRTAAACAVG--
 C G A T C A T G C G T A C A G T C G A T C T G A G C T A C G T A G T C A C T G A A G T C G T C A G T C A A T G C A C G T G T C A
A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGAKTAWAAACMACTA
CCGTATTATAAACAA---
 A C G T A C G T C G A T C A T G C G T A C A G T C G A T C T G A G C T A C G T A G T C A C T G A A G T C G T C A G T C A A T G C A C G T G T C A
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGAKTAWAAACMACTA-
TAAATGTAAACAAAGGT
 C G A T C A T G C G T A C A G T C G A T C T G A G C T A C G T A G T C A C T G A A G T C G T C A G T C A A T G C A C G T G T C A A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGAKTAWAAACMACTA-
YTAATTRAWWCCAGATGT
 A C G T C G A T C A T G C G T A C A G T C G A T C T G A G C T A C G T A G T C A C T G A A G T C G T C A G T C A A T G C A C G T G T C A A C G T
G A C T C G A T C T G A G T C A G A C T C G A T T C G A C G T A G C T A G C T A T G A C G T A C C G T A A C T G T G C A C G A T A C T G A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGAKTAWAAACMACTA
-WWATRTAAACAN---
 C G A T C A T G C G T A C A G T C G A T C T G A G C T A C G T A G T C A C T G A A G T C G T C A G T C A A T G C A C G T G T C A
A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGAKTAWAAACMACTA-
AAAATGTAAACAAACAG
 C G A T C A T G C G T A C A G T C G A T C T G A G C T A C G T A G T C A C T G A A G T C G T C A G T C A A T G C A C G T G T C A A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGAKTAWAAACMACTA-
AAAATGTAAACAAACAG
 C G A T C A T G C G T A C A G T C G A T C T G A G C T A C G T A G T C A C T G A A G T C G T C A G T C A A T G C A C G T G T C A A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0001.1_Arid3a_1/Jaspar

Match Rank:8
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TGAKTAWAAACMACTA
GGGTTTAATTAAAATTC----
 A C G T A C G T A C G T A C G T A C G T C G A T C A T G C G T A C A G T C G A T C T G A G C T A C G T A G T C A C T G A A G T C G T C A G T C A A T G C A C G T G T C A
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C A C G T A C G T A C G T A C G T

PH0100.1_Lmx1a/Jaspar

Match Rank:9
Score:0.51
Offset:-5
Orientation:forward strand
Alignment:-----TGAKTAWAAACMACTA
CGAATTAATTAAAAACC----
 A C G T A C G T A C G T A C G T A C G T C G A T C A T G C G T A C A G T C G A T C T G A G C T A C G T A G T C A C T G A A G T C G T C A G T C A A T G C A C G T G T C A
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGAKTAWAAACMACTA
AAAGTAAACA------
 C G A T C A T G C G T A C A G T C G A T C T G A G C T A C G T A G T C A C T G A A G T C G T C A G T C A A T G C A C G T G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T