Information for 9-GTGGCCTCTTCTGCVT (Motif 15)

C T A G A C G T A C T G A C T G G T A C A T G C A C G T A T G C A C G T A C G T A G T C A C G T C T A G A G T C T G A C A C G T
Reverse Opposite:
C G T A A C T G C T A G A G T C C G T A A C T G C G T A C G T A A T C G G T C A A T C G A C T G A G T C A G T C C G T A A G T C
p-value:1e-7
log p-value:-1.756e+01
Information Content per bp:1.816
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 23.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GTGGCCTCTTCTGCVT
------GCTTCC----
 C T A G A C G T A C T G A C T G G T A C A T G C A C G T A T G C A C G T A C G T A G T C A C G T C T A G A G T C T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTGGCCTCTTCTGCVT
NNGCACCTTTCTCC--
 C T A G A C G T A C T G A C T G G T A C A T G C A C G T A T G C A C G T A C G T A G T C A C G T C T A G A G T C T G A C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTGGCCTCTTCTGCVT
GTGGAT----------
 C T A G A C G T A C T G A C T G G T A C A T G C A C G T A T G C A C G T A C G T A G T C A C G T C T A G A G T C T G A C A C G T
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GTGGCCTCTTCTGCVT
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T C T A G A C G T A C T G A C T G G T A C A T G C A C G T A T G C A C G T A C G T A G T C A C G T C T A G A G T C T G A C A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GTGGCCTCTTCTGCVT
GTGGCGTGACNG----
 C T A G A C G T A C T G A C T G G T A C A T G C A C G T A T G C A C G T A C G T A G T C A C G T C T A G A G T C T G A C A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GTGGCCTCTTCTGCVT
NNATTGGACTTTNGNN---
 A C G T A C G T A C G T C T A G A C G T A C T G A C T G G T A C A T G C A C G T A T G C A C G T A C G T A G T C A C G T C T A G A G T C T G A C A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:7
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:GTGGCCTCTTCTGCVT-
-----CACTTCCYCTTT
 C T A G A C G T A C T G A C T G G T A C A T G C A C G T A T G C A C G T A C G T A G T C A C G T C T A G A G T C T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:8
Score:0.47
Offset:2
Orientation:forward strand
Alignment:GTGGCCTCTTCTGCVT---
--CTAAGGTTCTAGATCAC
 C T A G A C G T A C T G A C T G G T A C A T G C A C G T A T G C A C G T A C G T A G T C A C G T C T A G A G T C T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:GTGGCCTCTTCTGCVT
ATGGGGTGAT------
 C T A G A C G T A C T G A C T G G T A C A T G C A C G T A T G C A C G T A C G T A G T C A C G T C T A G A G T C T G A C A C G T
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:10
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--GTGGCCTCTTCTGCVT
TTCTAGAABNTTCTA---
 A C G T A C G T C T A G A C G T A C T G A C T G G T A C A T G C A C G T A T G C A C G T A C G T A G T C A C G T C T A G A G T C T G A C A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A A C G T A C G T A C G T