Information for 1-GGSASKSGGCAGSRGG (Motif 1)

A C T G A C T G A T G C C G T A A T G C A C G T A T C G C T A G A C T G A G T C C G T A A C T G A T G C C T G A A C T G A C T G
Reverse Opposite:
A G T C A G T C A G C T A T C G A G T C A C G T A C T G A G T C A G T C A T G C G T C A A T C G C G A T A T C G A G T C A G T C
p-value:1e-13
log p-value:-3.109e+01
Information Content per bp:1.853
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 21.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0124.1_Gabpa_2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGSASKSGGCAGSRGG
NNNNGGGGGAAGANGG
 A C T G A C T G A T G C C G T A A T G C A C G T A T C G C T A G A C T G A G T C C G T A A C T G A T G C C T G A A C T G A C T G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GGSASKSGGCAGSRGG--
------SDGCAGGTGCNS
 A C T G A C T G A T G C C G T A A T G C A C G T A T C G C T A G A C T G A G T C C G T A A C T G A T G C C T G A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGSASKSGGCAGSRGG
---NGTGGGCAT----
 A C T G A C T G A T G C C G T A A T G C A C G T A T C G C T A G A C T G A G T C C G T A A C T G A T G C C T G A A C T G A C T G
A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GGSASKSGGCAGSRGG-----
------DCHCAGCAGGRGGCC
 A C T G A C T G A T G C C G T A A T G C A C G T A T C G C T A G A C T G A G T C C G T A A C T G A T G C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGSASKSGGCAGSRGG--
---NCGCAGCGGGGGGTC
 A C T G A C T G A T G C C G T A A T G C A C G T A T C G C T A G A C T G A G T C C G T A A C T G A T G C C T G A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GGSASKSGGCAGSRGG---
----CACGGCAGTTGGTNN
 A C T G A C T G A T G C C G T A A T G C A C G T A T C G C T A G A C T G A G T C C G T A A C T G A T G C C T G A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGSASKSGGCAGSRGG
GGGNGGGGGCGGGGC-
 A C T G A C T G A T G C C G T A A T G C A C G T A T C G C T A G A C T G A G T C C G T A A C T G A T G C C T G A A C T G A C T G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGSASKSGGCAGSRGG
-GGCGGGGGCGGGGG-
 A C T G A C T G A T G C C G T A A T G C A C G T A T C G C T A G A C T G A G T C C G T A A C T G A T G C C T G A A C T G A C T G
A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGSASKSGGCAGSRGG
----CACAGCAGGGGG
 A C T G A C T G A T G C C G T A A T G C A C G T A T C G C T A G A C T G A G T C C G T A A C T G A T G C C T G A A C T G A C T G
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GGSASKSGGCAGSRGG-
-----NNVVCAGCTGBN
 A C T G A C T G A T G C C G T A A T G C A C G T A T C G C T A G A C T G A G T C C G T A A C T G A T G C C T G A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T