Information for 18-GGGATGAGAG (Motif 33)

A C T G A C T G A T C G C G T A A C G T A T C G C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A T G C C G T A A C G T A T G C A G T C A G T C
p-value:1e-7
log p-value:-1.697e+01
Information Content per bp:1.949
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets70.4 +/- 18.4bp
Average Position of motif in Background39.7 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1/MA0682.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGATGAGAG
GGGATTAA--
 A C T G A C T G A T C G C G T A A C G T A T C G C G T A A C T G C G T A A C T G
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGATGAGAG
NNGGATTAGN-
 A C G T A C T G A C T G A T C G C G T A A C G T A T C G C G T A A C T G C G T A A C T G
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGATGAGAG
NGGATTAN--
 A C T G A C T G A T C G C G T A A C G T A T C G C G T A A C T G C G T A A C T G
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGATGAGAG
GGGATTANN-
 A C T G A C T G A T C G C G T A A C G T A T C G C G T A A C T G C G T A A C T G
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGATGAGAG
GNGGATTAGN-
 A C G T A C T G A C T G A T C G C G T A A C G T A T C G C G T A A C T G C G T A A C T G
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GGGATGAGAG
NNNNGGGGGAAGANGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A A C G T A T C G C G T A A C T G C G T A A C T G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGGATGAGAG
RGGATTAR--
 A C T G A C T G A T C G C G T A A C G T A T C G C G T A A C T G C G T A A C T G
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGATGAGAG-
GGTGYTGACAGS
 A C G T A C T G A C T G A T C G C G T A A C G T A T C G C G T A A C T G C G T A A C T G A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

PH0035.1_Gsc/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGGATGAGAG---
NNAAGGGATTAACGANT
 A C G T A C G T A C G T A C G T A C T G A C T G A T C G C G T A A C G T A T C G C G T A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGGATGAGAG
-GGATTAGC-
 A C T G A C T G A T C G C G T A A C G T A T C G C G T A A C T G C G T A A C T G
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T