Information for 4-RGCGCAGCGGCCGCGC (Motif 32)

T C A G C T A G A G T C C T A G A T G C T C G A A T C G A G T C A T C G A T C G A G T C A T G C A C T G A T G C A C T G A T G C
Reverse Opposite:
A T C G G T A C A T C G T G A C T A C G C T A G A T G C T A G C A C T G A T G C A G C T A T C G G A T C T A C G A G T C A G T C
p-value:1e-7
log p-value:-1.764e+01
Information Content per bp:1.728
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets55.9 +/- 26.0bp
Average Position of motif in Background48.2 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:RGCGCAGCGGCCGCGC
--CGCAGCTGCG----
 T C A G C T A G A G T C C T A G A T G C T C G A A T C G A G T C A T C G A T C G A G T C A T G C A C T G A T G C A C T G A T G C
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:RGCGCAGCGGCCGCGC
--AGCAGCTGCTNN--
 T C A G C T A G A G T C C T A G A T G C T C G A A T C G A G T C A T C G A T C G A G T C A T G C A C T G A T G C A C T G A T G C
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:RGCGCAGCGGCCGCGC
--TGCAGCTGTCCCT-
 T C A G C T A G A G T C C T A G A T G C T C G A A T C G A G T C A T C G A T C G A G T C A T G C A C T G A T G C A C T G A T G C
A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:RGCGCAGCGGCCGCGC
----CAACGTCCGCGG
 T C A G C T A G A G T C C T A G A T G C T C G A A T C G A G T C A T C G A T C G A G T C A T G C A C T G A T G C A C T G A T G C
A C G T A C G T A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--RGCGCAGCGGCCGCGC
NNNNAGCAGCTGCTGAN-
 A C G T A C G T T C A G C T A G A G T C C T A G A T G C T C G A A T C G A G T C A T C G A T C G A G T C A T G C A C T G A T G C A C T G A T G C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RGCGCAGCGGCCGCGC
-NNGCAGCTGTC----
 T C A G C T A G A G T C C T A G A T G C T C G A A T C G A G T C A T C G A T C G A G T C A T G C A C T G A T G C A C T G A T G C
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:RGCGCAGCGGCCGCGC
---NCAGCTGCTG---
 T C A G C T A G A G T C C T A G A T G C T C G A A T C G A G T C A T C G A T C G A G T C A T G C A C T G A T G C A C T G A T G C
A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:RGCGCAGCGGCCGCGC-
------GCGCCTGCGCA
 T C A G C T A G A G T C C T A G A T G C T C G A A T C G A G T C A T C G A T C G A G T C A T G C A C T G A T G C A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:RGCGCAGCGGCCGCGC
--AGCAGCTGCT----
 T C A G C T A G A G T C C T A G A T G C T C G A A T C G A G T C A T C G A T C G A G T C A T G C A C T G A T G C A C T G A T G C
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:RGCGCAGCGGCCGCGC-
--AGCAACAGCCGCACC
 T C A G C T A G A G T C C T A G A T G C T C G A A T C G A G T C A T C G A T C G A G T C A T G C A C T G A T G C A C T G A T G C A C G T
A C G T A C G T T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C