Information for 19-CATGACTAAWGCW (Motif 29)

A G T C T C G A A C G T A T C G G T C A T A G C A G C T T G C A G T C A C G A T T A C G G T A C C G A T
Reverse Opposite:
C G T A A C T G A T G C C G T A C A G T A C G T T C G A A T C G A C G T A T G C C G T A A G C T T C A G
p-value:1e-8
log p-value:-2.026e+01
Information Content per bp:1.619
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.0 +/- 21.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CATGACTAAWGCW-
WYATGCATWATGCAT
 A C G T A G T C T C G A A C G T A T C G G T C A T A G C A G C T T G C A G T C A C G A T T A C G G T A C C G A T A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CATGACTAAWGCW-
TCATGAATWATTCAT
 A C G T A G T C T C G A A C G T A T C G G T C A T A G C A G C T T G C A G T C A C G A T T A C G G T A C C G A T A C G T
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATGACTAAWGCW
ACCGTGACTAATTNN
 A C G T A C G T A G T C T C G A A C G T A T C G G T C A T A G C A G C T T G C A G T C A C G A T T A C G G T A C C G A T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

NFE2/MA0841.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CATGACTAAWGCW
CATGACTCATC--
 A G T C T C G A A C G T A T C G G T C A T A G C A G C T T G C A G T C A C G A T T A C G G T A C C G A T
T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CATGACTAAWGCW
-ATGACTCAT---
 A G T C T C G A A C G T A T C G G T C A T A G C A G C T T G C A G T C A C G A T T A C G G T A C C G A T
A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATGACTAAWGCW
-ATGCATAATTCA
 A G T C T C G A A C G T A T C G G T C A T A G C A G C T T G C A G T C A C G A T T A C G G T A C C G A T
A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CATGACTAAWGCW
CATGAC-------
 A G T C T C G A A C G T A T C G G T C A T A G C A G C T T G C A G T C A C G A T T A C G G T A C C G A T
T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CATGACTAAWGCW
DATGASTCATNN-
 A G T C T C G A A C G T A T C G G T C A T A G C A G C T T G C A G T C A C G A T T A C G G T A C C G A T
C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C A C G T

JUND/MA0491.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CATGACTAAWGCW
GGTGACTCATC--
 A G T C T C G A A C G T A T C G G T C A T A G C A G C T T G C A G T C A C G A T T A C G G T A C C G A T
C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CATGACTAAWGCW
-ATGACTCATC--
 A G T C T C G A A C G T A T C G G T C A T A G C A G C T T G C A G T C A C G A T T A C G G T A C C G A T
A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C A C G T A C G T