Information for 12-ACAATGGGCT (Motif 24)

C G T A T A G C T C G A C T G A C A G T A C T G A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C A G T C G C T A A G C T A C G T A C T G A C G T
p-value:1e-10
log p-value:-2.309e+01
Information Content per bp:1.859
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets61.6 +/- 20.3bp
Average Position of motif in Background57.9 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----ACAATGGGCT--
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A C G T C G T A T A G C T C G A C T G A C A G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-ACAATGGGCT
AACAAAGG---
 A C G T C G T A T A G C T C G A C T G A C A G T A C T G A C T G A C T G A G T C A C G T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--ACAATGGGCT
GAACAATGGN--
 A C G T A C G T C G T A T A G C T C G A C T G A C A G T A C T G A C T G A C T G A G T C A C G T
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGGGCT
VRAACAATGG---
 A C G T A C G T A C G T C G T A T A G C T C G A C T G A C A G T A C T G A C T G A C T G A G T C A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ACAATGGGCT
RACAAWGG---
 A C G T C G T A T A G C T C G A C T G A C A G T A C T G A C T G A C T G A G T C A C G T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ACAATGGGCT
RAACAATGGN--
 A C G T A C G T C G T A T A G C T C G A C T G A C A G T A C T G A C T G A C T G A G T C A C G T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGGGCT
VRRACAAWGG---
 A C G T A C G T A C G T C G T A T A G C T C G A C T G A C A G T A C T G A C T G A C T G A G T C A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACAATGGGCT--
ACAAAGGNBCCT
 C G T A T A G C T C G A C T G A C A G T A C T G A C T G A C T G A G T C A C G T A C G T A C G T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox6/MA0515.1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGGGCT
AAAACAATGG---
 A C G T A C G T A C G T C G T A T A G C T C G A C T G A C A G T A C T G A C T G A C T G A G T C A C G T
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACAATGGGCT
GAACAATGG---
 A C G T A C G T C G T A T A G C T C G A C T G A C A G T A C T G A C T G A C T G A G T C A C G T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T