Information for 13-GGAATCATTCCTT (Motif 18)

C T A G A T C G C T G A G T C A A C G T T G A C C G T A G A C T A G C T A G T C A G T C A G C T A G C T
Reverse Opposite:
T C G A C T G A C T A G T A C G C T G A C T G A C G A T A C T G T G C A A C G T A G C T A T G C A G T C
p-value:1e-11
log p-value:-2.716e+01
Information Content per bp:1.733
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.0 +/- 23.9bp
Average Position of motif in Background48.4 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGAATCATTCCTT
--AATTATT----
 C T A G A T C G C T G A G T C A A C G T T G A C C G T A G A C T A G C T A G T C A G T C A G C T A G C T
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGAATCATTCCTT
AGAGGAA---------
 A C G T A C G T A C G T C T A G A T C G C T G A G T C A A C G T T G A C C G T A G A C T A G C T A G T C A G T C A G C T A G C T
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGAATCATTCCTT
NNTGGAAANN------
 A C G T A C G T A C G T C T A G A T C G C T G A G T C A A C G T T G A C C G T A G A C T A G C T A G T C A G T C A G C T A G C T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGAATCATTCCTT
NCTGGAATGC------
 A C G T A C G T A C G T C T A G A T C G C T G A G T C A A C G T T G A C C G T A G A C T A G C T A G T C A G T C A G C T A G C T
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGAATCATTCCTT
CCWGGAATGY------
 A C G T A C G T A C G T C T A G A T C G C T G A G T C A A C G T T G A C C G T A G A C T A G C T A G T C A G T C A G C T A G C T
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGAATCATTCCTT
-GAATGTTTGTTT
 C T A G A T C G C T G A G T C A A C G T T G A C C G T A G A C T A G C T A G T C A G T C A G C T A G C T
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGAATCATTCCTT
TCATGAATWATTCAT-
 A C G T A C G T A C G T C T A G A T C G C T G A G T C A A C G T T G A C C G T A G A C T A G C T A G T C A G T C A G C T A G C T
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGAATCATTCCTT
TGAATTATGCAT-
 C T A G A T C G C T G A G T C A A C G T T G A C C G T A G A C T A G C T A G T C A G T C A G C T A G C T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGAATCATTCCTT
AATGGAAAAT------
 A C G T A C G T A C G T C T A G A T C G C T G A G T C A A C G T T G A C C G T A G A C T A G C T A G T C A G T C A G C T A G C T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGAATCATTCCTT
---CACATTCCAT
 C T A G A T C G C T G A G T C A A C G T T G A C C G T A G A C T A G C T A G T C A G T C A G C T A G C T
A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T