Information for 1-GCTYCTCRGCCAGCCT (Motif 10)

A C T G G T A C A C G T A G T C G A T C A G C T A G T C C T A G A T C G G T A C G T A C C G T A A T C G T A G C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G A T G C C G A T A C T G A C T G A T G C G A T C T C A G T C G A C T A G C T A G C G T A A C T G A G T C
p-value:1e-14
log p-value:-3.331e+01
Information Content per bp:1.749
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.0 +/- 17.3bp
Average Position of motif in Background51.9 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCTYCTCRGCCAGCCT
NGCTN------------
 A C G T A C T G G T A C A C G T A G T C G A T C A G C T A G T C C T A G A T C G G T A C G T A C C G T A A T C G T A G C A G T C A G C T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:GCTYCTCRGCCAGCCT-
---------BCAGACWA
 A C T G G T A C A C G T A G T C G A T C A G C T A G T C C T A G A T C G G T A C G T A C C G T A A T C G T A G C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GCTYCTCRGCCAGCCT---
---ACTATGCCAACCTACC
 A C T G G T A C A C G T A G T C G A T C A G C T A G T C C T A G A T C G G T A C G T A C C G T A A T C G T A G C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.47
Offset:-6
Orientation:forward strand
Alignment:------GCTYCTCRGCCAGCCT
GAGCCTGGTACTGWGCCTGR--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C G T A G T C G A T C A G C T A G T C C T A G A T C G G T A C G T A C C G T A A T C G T A G C A G T C A G C T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.47
Offset:9
Orientation:reverse strand
Alignment:GCTYCTCRGCCAGCCT-
---------CCAGACAG
 A C T G G T A C A C G T A G T C G A T C A G C T A G T C C T A G A T C G G T A C G T A C C G T A A T C G T A G C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.47
Offset:0
Orientation:forward strand
Alignment:GCTYCTCRGCCAGCCT
GCTCCG----------
 A C T G G T A C A C G T A G T C G A T C A G C T A G T C C T A G A T C G G T A C G T A C C G T A A T C G T A G C A G T C A G C T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-GCTYCTCRGCCAGCCT---
GCCTCCTCCMTCWGACTGKS
 A C G T A C T G G T A C A C G T A G T C G A T C A G C T A G T C C T A G A T C G G T A C G T A C C G T A A T C G T A G C A G T C A G C T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.46
Offset:0
Orientation:forward strand
Alignment:GCTYCTCRGCCAGCCT
GCTTCC----------
 A C T G G T A C A C G T A G T C G A T C A G C T A G T C C T A G A T C G G T A C G T A C C G T A A T C G T A G C A G T C A G C T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.46
Offset:7
Orientation:reverse strand
Alignment:GCTYCTCRGCCAGCCT
-------TGCCAA---
 A C T G G T A C A C G T A G T C G A T C A G C T A G T C C T A G A T C G G T A C G T A C C G T A A T C G T A G C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.45
Offset:6
Orientation:reverse strand
Alignment:GCTYCTCRGCCAGCCT
------ATGCCAGACN
 A C T G G T A C A C G T A G T C G A T C A G C T A G T C C T A G A T C G G T A C G T A C C G T A A T C G T A G C A G T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C