Information for 5-TCCTCAGCTCCGC (Motif 7)

A G C T A G T C A T G C C A G T A T G C C T G A A T C G A G T C G C A T A G T C A T G C A C T G A G T C
Reverse Opposite:
T A C G A G T C A T C G A C T G C G T A A C T G A T G C A G C T A T C G G T C A A T C G A C T G T C G A
p-value:1e-14
log p-value:-3.307e+01
Information Content per bp:1.798
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif54.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets38.7 +/- 25.6bp
Average Position of motif in Background50.1 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.69
Offset:6
Orientation:forward strand
Alignment:TCCTCAGCTCCGC
------GCTCCG-
 A G C T A G T C A T G C C A G T A T G C C T G A A T C G A G T C G C A T A G T C A T G C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TCCTCAGCTCCGC-----
------GCTCCGCCCMCY
 A G C T A G T C A T G C C A G T A T G C C T G A A T C G A G T C G C A T A G T C A T G C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCCTCAGCTCCGC
--CGCAGCTGCG-
 A G C T A G T C A T G C C A G T A T G C C T G A A T C G A G T C G C A T A G T C A T G C A C T G A G T C
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TCCTCAGCTCCGC-----
----NAGCCCCGCCCCCN
 A G C T A G T C A T G C C A G T A T G C C T G A A T C G A G T C G C A T A G T C A T G C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TCCTCAGCTCCGC----
-----GGCCCCGCCCCC
 A G C T A G T C A T G C C A G T A T G C C T G A A T C G A G T C G C A T A G T C A T G C A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TCCTCAGCTCCGC
----CAGCC----
 A G C T A G T C A T G C C A G T A T G C C T G A A T C G A G T C G C A T A G T C A T G C A C T G A G T C
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TCCTCAGCTCCGC-------
---TACGCCCCGCCACTCTG
 A G C T A G T C A T G C C A G T A T G C C T G A A T C G A G T C G C A T A G T C A T G C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

EGR1/MA0162.2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCCTCAGCTCCGC-
CCCCCGCCCCCGCC
 A G C T A G T C A T G C C A G T A T G C C T G A A T C G A G T C G C A T A G T C A T G C A C T G A G T C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCCTCAGCTCCGC---
CTCAGCAGCTGCTACTG
 A C G T A G C T A G T C A T G C C A G T A T G C C T G A A T C G A G T C G C A T A G T C A T G C A C T G A G T C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCAGCTCCGC
TGAGTCAGCA----
 A C G T A G C T A G T C A T G C C A G T A T G C C T G A A T C G A G T C G C A T A G T C A T G C A C T G A G T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T