Information for 17-AGCTAAGGGAGCC (Motif 26)

G T C A A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C A C G T A T G C A G T C A G T C A C G T C A G T C G T A A C T G A G T C A C G T
p-value:1e-7
log p-value:-1.741e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 18.3bp
Average Position of motif in Background42.3 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:AGCTAAGGGAGCC
------CGGAGC-
 G T C A A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGCTAAGGGAGCC
--CTAATKGV---
 G T C A A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A G T C
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCTAAGGGAGCC
CAGATAAGGN----
 A C G T G T C A A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A G T C
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCTAAGGGAGCC
NAGATAAGNN----
 A C G T G T C A A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A G T C
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGCTAAGGGAGCC
NVAGATAAGR-----
 A C G T A C G T G T C A A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A G T C
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGCTAAGGGAGCC
NNGAGATAAGA-----
 A C G T A C G T A C G T G T C A A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A G T C
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGCTAAGGGAGCC
ANAGATAAGAA----
 A C G T A C G T G T C A A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A G T C
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGCTAAGGGAGCC
-GRTGMTRGAGCC
 G T C A A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A G T C
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

PB0052.1_Plagl1_1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGCTAAGGGAGCC-----
--NNNGGGGCGCCCCCNN
 G T C A A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCTAAGGGAGCC
AGATAAGA-----
 G T C A A C T G A G T C A C G T G C T A C G T A A C T G A C T G A T C G C G T A A C T G A G T C A G T C
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T