Information for 8-CTGCCAATCAGCG (Motif 9)

A G T C C A G T C A T G A G T C A G T C C T G A G T C A A C G T A T G C G T C A A T C G G T A C T C A G
Reverse Opposite:
A G T C A C T G A T G C A C G T A T C G G T C A A C G T A G C T C T A G A C T G G A T C G C T A A C T G
p-value:1e-11
log p-value:-2.601e+01
Information Content per bp:1.785
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif31.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets43.8 +/- 29.9bp
Average Position of motif in Background46.0 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCAATCAGCG----
TGGACCAATCAGCACTCT
A C G T A G T C C A G T C A T G A G T C A G T C C T G A G T C A A C G T A T G C G T C A A T C G G T A C T C A G A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----CTGCCAATCAGCG
AAATGGACCAATCAG--
A C G T A C G T A C G T A C G T A G T C C A G T C A T G A G T C A G T C C T G A G T C A A C G T A T G C G T C A A T C G G T A C T C A G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CTGCCAATCAGCG
SCTGTCAVTCAV--
A C G T A G T C C A G T C A T G A G T C A G T C C T G A G T C A A C G T A T G C G T C A A T C G G T A C T C A G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CTGCCAATCAGCG
-AGCCAATCGG--
A G T C C A G T C A T G A G T C A G T C C T G A G T C A A C G T A T G C G T C A A T C G G T A C T C A G
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTGCCAATCAGCG
NCTGTCAATCAN--
A C G T A G T C C A G T C A T G A G T C A G T C C T G A G T C A A C G T A T G C G T C A A T C G G T A C T C A G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CTGCCAATCAGCG
ACTAGCCAATCA---
A C G T A C G T A G T C C A G T C A T G A G T C A G T C C T G A G T C A A C G T A T G C G T C A A T C G G T A C T C A G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CTGCCAATCAGCG
GSCTGTCACTCA---
A C G T A C G T A G T C C A G T C A T G A G T C A G T C C T G A G T C A A C G T A T G C G T C A A T C G G T A C T C A G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CTGCCAATCAGCG
---CCAATCAA--
A G T C C A G T C A T G A G T C A G T C C T G A G T C A A C G T A T G C G T C A A T C G G T A C T C A G
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

PH0097.1_Lhx6_2/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTGCCAATCAGCG---
TCCACTAATTAGCGGTT
A C G T A G T C C A G T C A T G A G T C A G T C C T G A G T C A A C G T A T G C G T C A A T C G G T A C T C A G A C G T A C G T A C G T
G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGCCAATCAGCG
-TGCCAA------
A G T C C A G T C A T G A G T C A G T C C T G A G T C A A C G T A T G C G T C A A T C G G T A C T C A G
A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T