Information for 14-TCGGTGACGC (Motif 28)

A C G T A G T C A C T G A C T G A C G T A C T G C G T A A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C G T A G T C C G T A A G T C A G T C A C T G C G T A
p-value:1e-6
log p-value:-1.597e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.2 +/- 20.6bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf3/MA0605.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TCGGTGACGC
--GATGACGT
 A C G T A G T C A C T G A C T G A C G T A C T G C G T A A G T C A C T G A G T C
A C G T A C G T A T C G C T G A A C G T A C T G C G T A A G T C C T A G G A C T

Atf1/MA0604.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCGGTGACGC-
---ATGACGTA
 A C G T A G T C A C T G A C T G A C G T A C T G C G T A A G T C A C T G A G T C A C G T
A C G T A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TCGGTGACGC
----TGACGT
 A C G T A G T C A C T G A C T G A C G T A C T G C G T A A G T C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

CREB1/MA0018.2/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TCGGTGACGC--
----TGACGTCA
 A C G T A G T C A C T G A C T G A C G T A C T G C G T A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCGGTGACGC---
-CGGTGACGTCAC
 A C G T A G T C A C T G A C T G A C G T A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

PB0004.1_Atf1_1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCGGTGACGC------
NCGATGACGTCATCGN
 A C G T A G T C A C T G A C T G A C G T A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C T C A G G A C T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCGGTGACGC---
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCGGTGACGC------
NNNNTGACCCGGCGCG
 A C G T A G T C A C T G A C T G A C G T A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

CREB3/MA0638.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCGGTGACGC-----
-NGATGACGTGGCAN
 A C G T A G T C A C T G A C T G A C G T A C T G C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCGGTGACGC
-NCGTGACN-
 A C G T A G T C A C T G A C T G A C G T A C T G C G T A A G T C A C T G A G T C
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T