Information for 12-GACABCACAK (Motif 25)

C T A G G T C A G T A C C G T A A G C T T A G C G T C A T G A C C T G A A C G T
Reverse Opposite:
T G C A G A C T A C T G C A G T A T C G T C A G C G A T A C T G C A G T G A T C
p-value:1e-7
log p-value:-1.770e+01
Information Content per bp:1.663
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif5.94%
Number of Background Sequences with motif1003.7
Percentage of Background Sequences with motif2.46%
Average Position of motif in Targets47.5 +/- 28.1bp
Average Position of motif in Background49.8 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GACABCACAK-
-AAACCACAGC
 C T A G G T C A G T A C C G T A A G C T T A G C G T C A T G A C C T G A A C G T A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GACABCACAK--
NWAACCACADNN
 C T A G G T C A G T A C C G T A A G C T T A G C G T C A T G A C C T G A A C G T A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GACABCACAK
NAAACCACAG
 C T A G G T C A G T A C C G T A A G C T T A G C G T C A T G A C C T G A A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GACABCACAK----
NNNTCCATCCCATAANN
 A C G T A C G T A C G T C T A G G T C A G T A C C G T A A G C T T A G C G T C A T G A C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GACABCACAK-
-AAACCACANN
 C T A G G T C A G T A C C G T A A G C T T A G C G T C A T G A C C T G A A C G T A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GACABCACAK--
-AAACCACAGAN
 C T A G G T C A G T A C C G T A A G C T T A G C G T C A T G A C C T G A A C G T A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GACABCACAK--
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A C G T A C G T C T A G G T C A G T A C C G T A A G C T T A G C G T C A T G A C C T G A A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

NRL/MA0842.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GACABCACAK-
GTCAGCANNTN
 C T A G G T C A G T A C C G T A A G C T T A G C G T C A T G A C C T G A A C G T A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GACABCACAK--
-AAATCACAGCA
 C T A G G T C A G T A C C G T A A G C T T A G C G T C A T G A C C T G A A C G T A C G T A C G T
A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GACABCACAK
SCTGTCARCACC-
 A C G T A C G T A C G T C T A G G T C A G T A C C G T A A G C T T A G C G T C A T G A C C T G A A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T