Information for 7-CAGACATGCCCTCAGC (Motif 22)

A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G C G T A A C T G A C T G A C T G A G T C C G T A A C G T A C T G A C G T A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.873e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.8 +/- 18.8bp
Average Position of motif in Background32.4 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CAGACATGCCCTCAGC-
-----ATGCCCTGAGGC
 A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGACATGCCCTCAGC
CCAGACRSVB-------
 A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CAGACATGCCCTCAGC
CAAATCCAGACATCACA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CAGACATGCCCTCAGC
-----CTGCCCGCA--
 A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CAGACATGCCCTCAGC
------TGACCTYA--
 A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CAGACATGCCCTCAGC
-----ATGCCCACC--
 A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGACATGCCCTCAGC
CCAGACAG---------
 A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CAGACATGCCCTCAGC-
-----ATGACGTCATCN
 A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

JUN/MA0488.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CAGACATGCCCTCAGC--
-----ATGACATCATCNN
 A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CAGACATGCCCTCAGC-
-----WTGSCCTSAGGS
 A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A G T C A G T C A G T C A C G T A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C