p-value: | 1e-23 |
log p-value: | -5.399e+01 |
Information Content per bp: | 1.718 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.19% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 49.9 +/- 20.1bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SRF/MA0083.3/Jaspar
Match Rank: | 1 |
Score: | 0.72 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | SCTTTGHCCAAATATG---- ----TGNCCATATATGGTCA |
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CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | SCTTTGHCCAAATATG- -----TNCCATATATGG |
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MF0008.1_MADS_class/Jaspar
Match Rank: | 3 |
Score: | 0.61 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | SCTTTGHCCAAATATG- -------CCATATATGG |
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RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---SCTTTGHCCAAATATG TGACCTTTGCCCTA----- |
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PB0078.1_Srf_1/Jaspar
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | SCTTTGHCCAAATATG--- -----TNCCATATATGGNA |
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PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---SCTTTGHCCAAATATG TGACCTTTGCCCCA----- |
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THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | SCTTTGHCCAAATATG--- ----TGWCCTCARNTGACC |
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Pparg::Rxra/MA0065.2/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---SCTTTGHCCAAATATG TGACCTTTGCCCTAN---- |
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PB0133.1_Hic1_2/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -SCTTTGHCCAAATATG GGGTGTGCCCAAAAGG- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | SCTTTGHCCAAATATG ----TGACCTYA---- |
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